The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa

Banyan tree or Ficus microcarpa is a large perennial plant with extraordinary aerial roots from the Moraceae family. In this study, the complete chloroplast genome sequence of F. microcarpa was assembled using PacBio data. The chloroplast genome size is 141,611 bp, consisting of a large single-copy...

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Autores principales: Lin, Enwen, Liao, Zhenyang, Xu, Xiuming, Zhang, Xingtan, Fang, Jingping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8890538/
https://www.ncbi.nlm.nih.gov/pubmed/35252575
http://dx.doi.org/10.1080/23802359.2021.1993097
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author Lin, Enwen
Liao, Zhenyang
Xu, Xiuming
Zhang, Xingtan
Fang, Jingping
author_facet Lin, Enwen
Liao, Zhenyang
Xu, Xiuming
Zhang, Xingtan
Fang, Jingping
author_sort Lin, Enwen
collection PubMed
description Banyan tree or Ficus microcarpa is a large perennial plant with extraordinary aerial roots from the Moraceae family. In this study, the complete chloroplast genome sequence of F. microcarpa was assembled using PacBio data. The chloroplast genome size is 141,611 bp, consisting of a large single-copy (LSC) region and a small single-copy (SSC) region of 101,835 bp and 9,676 bp, respectively, which are separated by a pair of 15,050 bp inverted repeat (IR) regions. The genome includes 74 protein-coding genes, 43 tRNA genes, and 8 rRNA genes. A phylogenetic tree reconstructed by 25 complete chloroplast genomes reveals that F. microcarpa is mostly related to Ficus racemosa.
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spelling pubmed-88905382022-03-03 The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa Lin, Enwen Liao, Zhenyang Xu, Xiuming Zhang, Xingtan Fang, Jingping Mitochondrial DNA B Resour Mitogenome Announcement Banyan tree or Ficus microcarpa is a large perennial plant with extraordinary aerial roots from the Moraceae family. In this study, the complete chloroplast genome sequence of F. microcarpa was assembled using PacBio data. The chloroplast genome size is 141,611 bp, consisting of a large single-copy (LSC) region and a small single-copy (SSC) region of 101,835 bp and 9,676 bp, respectively, which are separated by a pair of 15,050 bp inverted repeat (IR) regions. The genome includes 74 protein-coding genes, 43 tRNA genes, and 8 rRNA genes. A phylogenetic tree reconstructed by 25 complete chloroplast genomes reveals that F. microcarpa is mostly related to Ficus racemosa. Taylor & Francis 2022-02-28 /pmc/articles/PMC8890538/ /pubmed/35252575 http://dx.doi.org/10.1080/23802359.2021.1993097 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Lin, Enwen
Liao, Zhenyang
Xu, Xiuming
Zhang, Xingtan
Fang, Jingping
The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title_full The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title_fullStr The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title_full_unstemmed The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title_short The complete chloroplast genome of the Chinese banyan tree Ficus microcarpa
title_sort complete chloroplast genome of the chinese banyan tree ficus microcarpa
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8890538/
https://www.ncbi.nlm.nih.gov/pubmed/35252575
http://dx.doi.org/10.1080/23802359.2021.1993097
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