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Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults
Tractography is a non-invasive technique to investigate the brain’s structural pathways (also referred to as tracts) that connect different brain regions. A commonly used approach for identifying tracts is with template-based clustering, where unsupervised clustering is first performed on a template...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8891507/ https://www.ncbi.nlm.nih.gov/pubmed/35250526 http://dx.doi.org/10.3389/fninf.2022.777853 |
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author | Kai, Jason Khan, Ali R. |
author_facet | Kai, Jason Khan, Ali R. |
author_sort | Kai, Jason |
collection | PubMed |
description | Tractography is a non-invasive technique to investigate the brain’s structural pathways (also referred to as tracts) that connect different brain regions. A commonly used approach for identifying tracts is with template-based clustering, where unsupervised clustering is first performed on a template in order to label corresponding tracts in unseen data. However, the reliability of this approach has not been extensively studied. Here, an investigation into template-based clustering reliability was performed, assessing the output from two datasets: Human Connectome Project (HCP) and MyConnectome project. The effect of intersubject variability on template-based clustering reliability was investigated, as well as the reliability of both deep and superficial white matter tracts. Identified tracts were evaluated by assessing Euclidean distances from a dataset-specific tract average centroid, the volumetric overlap across corresponding tracts, and along-tract agreement of quantitative values. Further, two template-based techniques were employed to evaluate the reliability of different clustering approaches. Reliability assessment can increase the confidence of a tract identifying technique in future applications to study pathways of interest. The two different template-based approaches exhibited similar reliability for identifying both deep white matter tracts and the superficial white matter. |
format | Online Article Text |
id | pubmed-8891507 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88915072022-03-04 Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults Kai, Jason Khan, Ali R. Front Neuroinform Neuroinformatics Tractography is a non-invasive technique to investigate the brain’s structural pathways (also referred to as tracts) that connect different brain regions. A commonly used approach for identifying tracts is with template-based clustering, where unsupervised clustering is first performed on a template in order to label corresponding tracts in unseen data. However, the reliability of this approach has not been extensively studied. Here, an investigation into template-based clustering reliability was performed, assessing the output from two datasets: Human Connectome Project (HCP) and MyConnectome project. The effect of intersubject variability on template-based clustering reliability was investigated, as well as the reliability of both deep and superficial white matter tracts. Identified tracts were evaluated by assessing Euclidean distances from a dataset-specific tract average centroid, the volumetric overlap across corresponding tracts, and along-tract agreement of quantitative values. Further, two template-based techniques were employed to evaluate the reliability of different clustering approaches. Reliability assessment can increase the confidence of a tract identifying technique in future applications to study pathways of interest. The two different template-based approaches exhibited similar reliability for identifying both deep white matter tracts and the superficial white matter. Frontiers Media S.A. 2022-02-17 /pmc/articles/PMC8891507/ /pubmed/35250526 http://dx.doi.org/10.3389/fninf.2022.777853 Text en Copyright © 2022 Kai and Khan. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroinformatics Kai, Jason Khan, Ali R. Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title | Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title_full | Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title_fullStr | Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title_full_unstemmed | Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title_short | Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults |
title_sort | assessing the reliability of template-based clustering for tractography in healthy human adults |
topic | Neuroinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8891507/ https://www.ncbi.nlm.nih.gov/pubmed/35250526 http://dx.doi.org/10.3389/fninf.2022.777853 |
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