Incorporating Within-Host Diversity in Phylogenetic Analyses for Detecting Clusters of New HIV Diagnoses

BACKGROUND: Phylogenetic analyses of HIV sequences are used to detect clusters and inform public health interventions. Conventional approaches summarize within-host HIV diversity with a single consensus sequence per host of the pol gene, obtained from Sanger or next-generation sequencing (NGS). Ther...

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Detalles Bibliográficos
Autores principales: Guang, August, Howison, Mark, Ledingham, Lauren, D’Antuono, Matthew, Chan, Philip A., Lawrence, Charles, Dunn, Casey W., Kantor, Rami
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Microbiology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8891961/
https://www.ncbi.nlm.nih.gov/pubmed/35250908
http://dx.doi.org/10.3389/fmicb.2021.803190

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