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Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts

Sarcopenia is an age-related disorder characterised by a progressive decrease in skeletal muscle mass. As the genetic biomarkers for sarcopenia are not yet well characterised, this study aimed to investigate the genetic variations related to sarcopenia in a relatively aged cohort, using genome-wide...

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Autores principales: Jin, Heejin, Yoo, Hyun Ju, Kim, Ye An, Lee, Ji Hyun, Lee, Young, Kwon, Seung-hyun, Seo, Young Joo, Lee, Seung Hun, Koh, Jung-Min, Ji, Yunmi, Do, Ah Ra, Won, Sungho, Seo, Je Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8894365/
https://www.ncbi.nlm.nih.gov/pubmed/35241739
http://dx.doi.org/10.1038/s41598-022-07567-9
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author Jin, Heejin
Yoo, Hyun Ju
Kim, Ye An
Lee, Ji Hyun
Lee, Young
Kwon, Seung-hyun
Seo, Young Joo
Lee, Seung Hun
Koh, Jung-Min
Ji, Yunmi
Do, Ah Ra
Won, Sungho
Seo, Je Hyun
author_facet Jin, Heejin
Yoo, Hyun Ju
Kim, Ye An
Lee, Ji Hyun
Lee, Young
Kwon, Seung-hyun
Seo, Young Joo
Lee, Seung Hun
Koh, Jung-Min
Ji, Yunmi
Do, Ah Ra
Won, Sungho
Seo, Je Hyun
author_sort Jin, Heejin
collection PubMed
description Sarcopenia is an age-related disorder characterised by a progressive decrease in skeletal muscle mass. As the genetic biomarkers for sarcopenia are not yet well characterised, this study aimed to investigate the genetic variations related to sarcopenia in a relatively aged cohort, using genome-wide association study (GWAS) meta-analyses of lean body mass (LBM) in 6961 subjects. Two Korean cohorts were analysed, and subgroup GWAS was conducted for appendicular skeletal muscle mass (ASM) and skeletal muscle index. The effects of significant single nucleotide polymorphisms (SNPs) on gene expression were also investigated using multiple expression quantitative trait loci datasets, differentially expressed gene analysis, and gene ontology analyses. Novel genetic biomarkers were identified for LBM (rs1187118; rs3768582) and ASM (rs6772958). Their related genes, including RPS10, NUDT3, NCF2, SMG7, and ARPC5, were differently expressed in skeletal muscle tissue, while GPD1L was not. Furthermore, the ‘mRNA destabilisation’ biological process was enriched for sarcopenia. Our study identified RPS10, NUDT3, and GPD1L as significant genetic biomarkers for sarcopenia. These genetic loci were related to lipid and energy metabolism, suggesting that genes involved in metabolic dysregulation may lead to the pathogenesis of age-related sarcopenia.
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spelling pubmed-88943652022-03-07 Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts Jin, Heejin Yoo, Hyun Ju Kim, Ye An Lee, Ji Hyun Lee, Young Kwon, Seung-hyun Seo, Young Joo Lee, Seung Hun Koh, Jung-Min Ji, Yunmi Do, Ah Ra Won, Sungho Seo, Je Hyun Sci Rep Article Sarcopenia is an age-related disorder characterised by a progressive decrease in skeletal muscle mass. As the genetic biomarkers for sarcopenia are not yet well characterised, this study aimed to investigate the genetic variations related to sarcopenia in a relatively aged cohort, using genome-wide association study (GWAS) meta-analyses of lean body mass (LBM) in 6961 subjects. Two Korean cohorts were analysed, and subgroup GWAS was conducted for appendicular skeletal muscle mass (ASM) and skeletal muscle index. The effects of significant single nucleotide polymorphisms (SNPs) on gene expression were also investigated using multiple expression quantitative trait loci datasets, differentially expressed gene analysis, and gene ontology analyses. Novel genetic biomarkers were identified for LBM (rs1187118; rs3768582) and ASM (rs6772958). Their related genes, including RPS10, NUDT3, NCF2, SMG7, and ARPC5, were differently expressed in skeletal muscle tissue, while GPD1L was not. Furthermore, the ‘mRNA destabilisation’ biological process was enriched for sarcopenia. Our study identified RPS10, NUDT3, and GPD1L as significant genetic biomarkers for sarcopenia. These genetic loci were related to lipid and energy metabolism, suggesting that genes involved in metabolic dysregulation may lead to the pathogenesis of age-related sarcopenia. Nature Publishing Group UK 2022-03-03 /pmc/articles/PMC8894365/ /pubmed/35241739 http://dx.doi.org/10.1038/s41598-022-07567-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Jin, Heejin
Yoo, Hyun Ju
Kim, Ye An
Lee, Ji Hyun
Lee, Young
Kwon, Seung-hyun
Seo, Young Joo
Lee, Seung Hun
Koh, Jung-Min
Ji, Yunmi
Do, Ah Ra
Won, Sungho
Seo, Je Hyun
Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title_full Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title_fullStr Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title_full_unstemmed Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title_short Unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on Korean cohorts
title_sort unveiling genetic variants for age-related sarcopenia by conducting a genome-wide association study on korean cohorts
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8894365/
https://www.ncbi.nlm.nih.gov/pubmed/35241739
http://dx.doi.org/10.1038/s41598-022-07567-9
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