Cargando…
Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images
PURPOSE: Low photon count in (89)Zr-Immuno-PET results in images with a low signal-to-noise ratio (SNR). Since PET radiomics are sensitive to noise, this study focuses on the impact of noise on radiomic features from (89)Zr-Immuno-PET clinical images. We hypothesise that (89)Zr-Immuno-PET derived ra...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8894530/ https://www.ncbi.nlm.nih.gov/pubmed/35239050 http://dx.doi.org/10.1186/s40658-022-00444-4 |
_version_ | 1784662689180549120 |
---|---|
author | Somasundaram, Ananthi García, David Vállez Pfaehler, Elisabeth Jauw, Yvonne W. S. Zijlstra, Josée M. van Dongen, Guus A. M. S. Menke-van der Houven van Oordt, Willemien C. Huisman, Marc C. de Vries, Elisabeth G. E. Boellaard, Ronald |
author_facet | Somasundaram, Ananthi García, David Vállez Pfaehler, Elisabeth Jauw, Yvonne W. S. Zijlstra, Josée M. van Dongen, Guus A. M. S. Menke-van der Houven van Oordt, Willemien C. Huisman, Marc C. de Vries, Elisabeth G. E. Boellaard, Ronald |
author_sort | Somasundaram, Ananthi |
collection | PubMed |
description | PURPOSE: Low photon count in (89)Zr-Immuno-PET results in images with a low signal-to-noise ratio (SNR). Since PET radiomics are sensitive to noise, this study focuses on the impact of noise on radiomic features from (89)Zr-Immuno-PET clinical images. We hypothesise that (89)Zr-Immuno-PET derived radiomic features have: (1) noise-induced variability affecting their precision and (2) noise-induced bias affecting their accuracy. This study aims to identify those features that are not or only minimally affected by noise in terms of precision and accuracy. METHODS: Count-split (89)Zr-Immuno-PET patient scans from previous studies with three different (89)Zr-labelled monoclonal antibodies were used to extract radiomic features at 50% (S50p) and 25% (S25p) of their original counts. Tumour lesions were manually delineated on the original full-count (89)Zr-Immuno-PET scans. Noise-induced variability and bias were assessed using intraclass correlation coefficient (ICC) and similarity distance metric (SDM), respectively. Based on the ICC and SDM values, the radiomic features were categorised as having poor [0, 0.5), moderate [0.5, 0.75), good [0.75, 0.9), or excellent [0.9, 1] precision and accuracy. The number of features classified into these categories was compared between the S50p and S25p images using Fisher’s exact test. All p values < 0.01 were considered statistically significant. RESULTS: For S50p, a total of 92% and 90% features were classified as having good or excellent ICC and SDM respectively, while for S25p, these decreased to 81% and 31%. In total, 148 features (31%) showed robustness to noise with good or moderate ICC and SDM in both S50p and S25p. The number of features classified into the four ICC and SDM categories between S50p and S25p was significantly different statistically. CONCLUSION: Several radiomic features derived from low SNR (89)Zr-Immuno-PET images exhibit noise-induced variability and/or bias. However, 196 features (43%) that show minimal noise-induced variability and bias in S50p images have been identified. These features are less affected by noise and are, therefore, suitable candidates to be further studied as prognostic and predictive quantitative biomarkers in (89)Zr-Immuno-PET studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40658-022-00444-4. |
format | Online Article Text |
id | pubmed-8894530 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-88945302022-03-08 Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images Somasundaram, Ananthi García, David Vállez Pfaehler, Elisabeth Jauw, Yvonne W. S. Zijlstra, Josée M. van Dongen, Guus A. M. S. Menke-van der Houven van Oordt, Willemien C. Huisman, Marc C. de Vries, Elisabeth G. E. Boellaard, Ronald EJNMMI Phys Original Research PURPOSE: Low photon count in (89)Zr-Immuno-PET results in images with a low signal-to-noise ratio (SNR). Since PET radiomics are sensitive to noise, this study focuses on the impact of noise on radiomic features from (89)Zr-Immuno-PET clinical images. We hypothesise that (89)Zr-Immuno-PET derived radiomic features have: (1) noise-induced variability affecting their precision and (2) noise-induced bias affecting their accuracy. This study aims to identify those features that are not or only minimally affected by noise in terms of precision and accuracy. METHODS: Count-split (89)Zr-Immuno-PET patient scans from previous studies with three different (89)Zr-labelled monoclonal antibodies were used to extract radiomic features at 50% (S50p) and 25% (S25p) of their original counts. Tumour lesions were manually delineated on the original full-count (89)Zr-Immuno-PET scans. Noise-induced variability and bias were assessed using intraclass correlation coefficient (ICC) and similarity distance metric (SDM), respectively. Based on the ICC and SDM values, the radiomic features were categorised as having poor [0, 0.5), moderate [0.5, 0.75), good [0.75, 0.9), or excellent [0.9, 1] precision and accuracy. The number of features classified into these categories was compared between the S50p and S25p images using Fisher’s exact test. All p values < 0.01 were considered statistically significant. RESULTS: For S50p, a total of 92% and 90% features were classified as having good or excellent ICC and SDM respectively, while for S25p, these decreased to 81% and 31%. In total, 148 features (31%) showed robustness to noise with good or moderate ICC and SDM in both S50p and S25p. The number of features classified into the four ICC and SDM categories between S50p and S25p was significantly different statistically. CONCLUSION: Several radiomic features derived from low SNR (89)Zr-Immuno-PET images exhibit noise-induced variability and/or bias. However, 196 features (43%) that show minimal noise-induced variability and bias in S50p images have been identified. These features are less affected by noise and are, therefore, suitable candidates to be further studied as prognostic and predictive quantitative biomarkers in (89)Zr-Immuno-PET studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s40658-022-00444-4. Springer International Publishing 2022-03-03 /pmc/articles/PMC8894530/ /pubmed/35239050 http://dx.doi.org/10.1186/s40658-022-00444-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Research Somasundaram, Ananthi García, David Vállez Pfaehler, Elisabeth Jauw, Yvonne W. S. Zijlstra, Josée M. van Dongen, Guus A. M. S. Menke-van der Houven van Oordt, Willemien C. Huisman, Marc C. de Vries, Elisabeth G. E. Boellaard, Ronald Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title | Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title_full | Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title_fullStr | Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title_full_unstemmed | Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title_short | Noise sensitivity of (89)Zr-Immuno-PET radiomics based on count-reduced clinical images |
title_sort | noise sensitivity of (89)zr-immuno-pet radiomics based on count-reduced clinical images |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8894530/ https://www.ncbi.nlm.nih.gov/pubmed/35239050 http://dx.doi.org/10.1186/s40658-022-00444-4 |
work_keys_str_mv | AT somasundaramananthi noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT garciadavidvallez noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT pfaehlerelisabeth noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT jauwyvonnews noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT zijlstrajoseem noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT vandongenguusams noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT menkevanderhouvenvanoordtwillemienc noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT huismanmarcc noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT devrieselisabethge noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages AT boellaardronald noisesensitivityof89zrimmunopetradiomicsbasedoncountreducedclinicalimages |