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Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study

BACKGROUND: Several prognostic scores have been proposed to predict functional outcomes after an acute ischemic stroke (AIS). Most of these scores are based on structured information and have been used to develop prediction models via the logistic regression method. With the increased use of electro...

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Autores principales: Sung, Sheng-Feng, Hsieh, Cheng-Yang, Hu, Ya-Han
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8895286/
https://www.ncbi.nlm.nih.gov/pubmed/35175201
http://dx.doi.org/10.2196/29806
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author Sung, Sheng-Feng
Hsieh, Cheng-Yang
Hu, Ya-Han
author_facet Sung, Sheng-Feng
Hsieh, Cheng-Yang
Hu, Ya-Han
author_sort Sung, Sheng-Feng
collection PubMed
description BACKGROUND: Several prognostic scores have been proposed to predict functional outcomes after an acute ischemic stroke (AIS). Most of these scores are based on structured information and have been used to develop prediction models via the logistic regression method. With the increased use of electronic health records and the progress in computational power, data-driven predictive modeling by using machine learning techniques is gaining popularity in clinical decision-making. OBJECTIVE: We aimed to investigate whether machine learning models created by using unstructured text could improve the prediction of functional outcomes at an early stage after AIS. METHODS: We identified all consecutive patients who were hospitalized for the first time for AIS from October 2007 to December 2019 by using a hospital stroke registry. The study population was randomly split into a training (n=2885) and test set (n=962). Free text in histories of present illness and computed tomography reports was transformed into input variables via natural language processing. Models were trained by using the extreme gradient boosting technique to predict a poor functional outcome at 90 days poststroke. Model performance on the test set was evaluated by using the area under the receiver operating characteristic curve (AUC). RESULTS: The AUCs of text-only models ranged from 0.768 to 0.807 and were comparable to that of the model using National Institutes of Health Stroke Scale (NIHSS) scores (0.811). Models using both patient age and text achieved AUCs of 0.823 and 0.825, which were similar to those of the model containing age and NIHSS scores (0.841); the model containing preadmission comorbidities, level of consciousness, age, and neurological deficit (PLAN) scores (0.837); and the model containing Acute Stroke Registry and Analysis of Lausanne (ASTRAL) scores (0.840). Adding variables from clinical text improved the predictive performance of the model containing age and NIHSS scores, the model containing PLAN scores, and the model containing ASTRAL scores (the AUC increased from 0.841 to 0.861, from 0.837 to 0.856, and from 0.840 to 0.860, respectively). CONCLUSIONS: Unstructured clinical text can be used to improve the performance of existing models for predicting poststroke functional outcomes. However, considering the different terminologies that are used across health systems, each individual health system may consider using the proposed methods to develop and validate its own models.
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spelling pubmed-88952862022-03-10 Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study Sung, Sheng-Feng Hsieh, Cheng-Yang Hu, Ya-Han JMIR Med Inform Original Paper BACKGROUND: Several prognostic scores have been proposed to predict functional outcomes after an acute ischemic stroke (AIS). Most of these scores are based on structured information and have been used to develop prediction models via the logistic regression method. With the increased use of electronic health records and the progress in computational power, data-driven predictive modeling by using machine learning techniques is gaining popularity in clinical decision-making. OBJECTIVE: We aimed to investigate whether machine learning models created by using unstructured text could improve the prediction of functional outcomes at an early stage after AIS. METHODS: We identified all consecutive patients who were hospitalized for the first time for AIS from October 2007 to December 2019 by using a hospital stroke registry. The study population was randomly split into a training (n=2885) and test set (n=962). Free text in histories of present illness and computed tomography reports was transformed into input variables via natural language processing. Models were trained by using the extreme gradient boosting technique to predict a poor functional outcome at 90 days poststroke. Model performance on the test set was evaluated by using the area under the receiver operating characteristic curve (AUC). RESULTS: The AUCs of text-only models ranged from 0.768 to 0.807 and were comparable to that of the model using National Institutes of Health Stroke Scale (NIHSS) scores (0.811). Models using both patient age and text achieved AUCs of 0.823 and 0.825, which were similar to those of the model containing age and NIHSS scores (0.841); the model containing preadmission comorbidities, level of consciousness, age, and neurological deficit (PLAN) scores (0.837); and the model containing Acute Stroke Registry and Analysis of Lausanne (ASTRAL) scores (0.840). Adding variables from clinical text improved the predictive performance of the model containing age and NIHSS scores, the model containing PLAN scores, and the model containing ASTRAL scores (the AUC increased from 0.841 to 0.861, from 0.837 to 0.856, and from 0.840 to 0.860, respectively). CONCLUSIONS: Unstructured clinical text can be used to improve the performance of existing models for predicting poststroke functional outcomes. However, considering the different terminologies that are used across health systems, each individual health system may consider using the proposed methods to develop and validate its own models. JMIR Publications 2022-02-17 /pmc/articles/PMC8895286/ /pubmed/35175201 http://dx.doi.org/10.2196/29806 Text en ©Sheng-Feng Sung, Cheng-Yang Hsieh, Ya-Han Hu. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 17.02.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Sung, Sheng-Feng
Hsieh, Cheng-Yang
Hu, Ya-Han
Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title_full Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title_fullStr Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title_full_unstemmed Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title_short Early Prediction of Functional Outcomes After Acute Ischemic Stroke Using Unstructured Clinical Text: Retrospective Cohort Study
title_sort early prediction of functional outcomes after acute ischemic stroke using unstructured clinical text: retrospective cohort study
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8895286/
https://www.ncbi.nlm.nih.gov/pubmed/35175201
http://dx.doi.org/10.2196/29806
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