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Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa)
Thirteen Gram-positive, catalase-positive, rod-shaped single colonies were obtained after culturing a strawberry leaf on de Man–Rogosa–Sharpe agar. Based on 16S rRNA gene and rpoA gene sequence similarities, ranging between 99.0–100% and 96.5–100%, respectively, the 13 isolates were found to be clos...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Microbiology Society
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8895651/ https://www.ncbi.nlm.nih.gov/pubmed/35060849 http://dx.doi.org/10.1099/ijsem.0.005193 |
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author | Legein, Marie Wittouck, Stijn Lebeer, Sarah |
author_facet | Legein, Marie Wittouck, Stijn Lebeer, Sarah |
author_sort | Legein, Marie |
collection | PubMed |
description | Thirteen Gram-positive, catalase-positive, rod-shaped single colonies were obtained after culturing a strawberry leaf on de Man–Rogosa–Sharpe agar. Based on 16S rRNA gene and rpoA gene sequence similarities, ranging between 99.0–100% and 96.5–100%, respectively, the 13 isolates were found to be closely related to each other. Two of the independent isolates, AMBP162(T) and AMBP252, were whole-genome sequenced, and showed to be undistinguishable with an average nucleotide identity (ANI) value of 100 %. Compared to the reference genomes for all species in the family Lactobacillaceae , the AMBP162(T) genome was most similar to the reference strain of Latilactobacillus curvatus with ANI of only 89.5 %, indicating they were a different species. Based on genotypic and phenotypic data, a novel Latilactobacillus species, Latilactobacillus fragifolii sp. nov., with the type strain AMBP162(T) (=LMG 32285(T)=CECT 30357(T)) is proposed. |
format | Online Article Text |
id | pubmed-8895651 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Microbiology Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-88956512022-03-07 Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) Legein, Marie Wittouck, Stijn Lebeer, Sarah Int J Syst Evol Microbiol New Taxa Thirteen Gram-positive, catalase-positive, rod-shaped single colonies were obtained after culturing a strawberry leaf on de Man–Rogosa–Sharpe agar. Based on 16S rRNA gene and rpoA gene sequence similarities, ranging between 99.0–100% and 96.5–100%, respectively, the 13 isolates were found to be closely related to each other. Two of the independent isolates, AMBP162(T) and AMBP252, were whole-genome sequenced, and showed to be undistinguishable with an average nucleotide identity (ANI) value of 100 %. Compared to the reference genomes for all species in the family Lactobacillaceae , the AMBP162(T) genome was most similar to the reference strain of Latilactobacillus curvatus with ANI of only 89.5 %, indicating they were a different species. Based on genotypic and phenotypic data, a novel Latilactobacillus species, Latilactobacillus fragifolii sp. nov., with the type strain AMBP162(T) (=LMG 32285(T)=CECT 30357(T)) is proposed. Microbiology Society 2022-01-21 /pmc/articles/PMC8895651/ /pubmed/35060849 http://dx.doi.org/10.1099/ijsem.0.005193 Text en © 2022 The Authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | New Taxa Legein, Marie Wittouck, Stijn Lebeer, Sarah Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title |
Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title_full |
Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title_fullStr |
Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title_full_unstemmed |
Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title_short |
Latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (Fragaria x ananassa) |
title_sort | latilactobacillus fragifolii sp. nov., isolated from leaves of a strawberry plant (fragaria x ananassa) |
topic | New Taxa |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8895651/ https://www.ncbi.nlm.nih.gov/pubmed/35060849 http://dx.doi.org/10.1099/ijsem.0.005193 |
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