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Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior

Dinocampus coccinellae (Hymenoptera: Braconidae) is a generalist parasitoid wasp that parasitizes >50 species of predatory lady beetles (Coleoptera: Coccinellidae), with thelytokous parthenogeny as its primary mode of reproduction. Here, we present the first high-quality genome of D. coccinellae...

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Autores principales: Sethuraman, Arun, Tovar, Alicia, Welch, Walker, Dettmers, Ryan, Arce, Camila, Skaggs, Timothy, Rothenberg, Alexander, Saisho, Roxane, Summerhays, Bryce, Cartmill, Ryan, Grenier, Christy, Vasquez, Yumary, Vansant, Hannah, Obrycki, John
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8896016/
https://www.ncbi.nlm.nih.gov/pubmed/35100359
http://dx.doi.org/10.1093/g3journal/jkac001
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author Sethuraman, Arun
Tovar, Alicia
Welch, Walker
Dettmers, Ryan
Arce, Camila
Skaggs, Timothy
Rothenberg, Alexander
Saisho, Roxane
Summerhays, Bryce
Cartmill, Ryan
Grenier, Christy
Vasquez, Yumary
Vansant, Hannah
Obrycki, John
author_facet Sethuraman, Arun
Tovar, Alicia
Welch, Walker
Dettmers, Ryan
Arce, Camila
Skaggs, Timothy
Rothenberg, Alexander
Saisho, Roxane
Summerhays, Bryce
Cartmill, Ryan
Grenier, Christy
Vasquez, Yumary
Vansant, Hannah
Obrycki, John
author_sort Sethuraman, Arun
collection PubMed
description Dinocampus coccinellae (Hymenoptera: Braconidae) is a generalist parasitoid wasp that parasitizes >50 species of predatory lady beetles (Coleoptera: Coccinellidae), with thelytokous parthenogeny as its primary mode of reproduction. Here, we present the first high-quality genome of D. coccinellae using a combination of short- and long-read sequencing technologies, followed by assembly and scaffolding of chromosomal segments using Chicago + HiC technologies. We also present a first-pass ab initio and a reference-based genome annotation and resolve timings of divergence and evolution of (1) solitary behavior vs eusociality, (2) arrhenotokous vs thelytokous parthenogenesis, and (3) rates of gene loss and gain among Hymenopteran lineages. Our study finds (1) at least 2 independent origins of eusociality and solitary behavior among Hymenoptera, (2) 2 independent origins of thelytokous parthenogenesis from ancestral arrhenotoky, and (3) accelerated rates of gene duplications, loss, and gain along the lineages leading to D. coccinellae. Our work both affirms the ancient divergence of Braconid wasps from ancestral Hymenopterans and accelerated rates of evolution in response to adaptations to novel hosts, including polyDNA viral coevolution.
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spelling pubmed-88960162022-03-07 Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior Sethuraman, Arun Tovar, Alicia Welch, Walker Dettmers, Ryan Arce, Camila Skaggs, Timothy Rothenberg, Alexander Saisho, Roxane Summerhays, Bryce Cartmill, Ryan Grenier, Christy Vasquez, Yumary Vansant, Hannah Obrycki, John G3 (Bethesda) Genome Report Dinocampus coccinellae (Hymenoptera: Braconidae) is a generalist parasitoid wasp that parasitizes >50 species of predatory lady beetles (Coleoptera: Coccinellidae), with thelytokous parthenogeny as its primary mode of reproduction. Here, we present the first high-quality genome of D. coccinellae using a combination of short- and long-read sequencing technologies, followed by assembly and scaffolding of chromosomal segments using Chicago + HiC technologies. We also present a first-pass ab initio and a reference-based genome annotation and resolve timings of divergence and evolution of (1) solitary behavior vs eusociality, (2) arrhenotokous vs thelytokous parthenogenesis, and (3) rates of gene loss and gain among Hymenopteran lineages. Our study finds (1) at least 2 independent origins of eusociality and solitary behavior among Hymenoptera, (2) 2 independent origins of thelytokous parthenogenesis from ancestral arrhenotoky, and (3) accelerated rates of gene duplications, loss, and gain along the lineages leading to D. coccinellae. Our work both affirms the ancient divergence of Braconid wasps from ancestral Hymenopterans and accelerated rates of evolution in response to adaptations to novel hosts, including polyDNA viral coevolution. Oxford University Press 2022-01-06 /pmc/articles/PMC8896016/ /pubmed/35100359 http://dx.doi.org/10.1093/g3journal/jkac001 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of Genetics Society of America. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Report
Sethuraman, Arun
Tovar, Alicia
Welch, Walker
Dettmers, Ryan
Arce, Camila
Skaggs, Timothy
Rothenberg, Alexander
Saisho, Roxane
Summerhays, Bryce
Cartmill, Ryan
Grenier, Christy
Vasquez, Yumary
Vansant, Hannah
Obrycki, John
Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title_full Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title_fullStr Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title_full_unstemmed Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title_short Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
title_sort genome of the parasitoid wasp dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
topic Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8896016/
https://www.ncbi.nlm.nih.gov/pubmed/35100359
http://dx.doi.org/10.1093/g3journal/jkac001
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