Cargando…

Core motifs predict dynamic attractors in combinatorial threshold-linear networks

Combinatorial threshold-linear networks (CTLNs) are a special class of inhibition-dominated TLNs defined from directed graphs. Like more general TLNs, they display a wide variety of nonlinear dynamics including multistability, limit cycles, quasiperiodic attractors, and chaos. In prior work, we have...

Descripción completa

Detalles Bibliográficos
Autores principales: Parmelee, Caitlyn, Moore, Samantha, Morrison, Katherine, Curto, Carina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8896682/
https://www.ncbi.nlm.nih.gov/pubmed/35245322
http://dx.doi.org/10.1371/journal.pone.0264456
_version_ 1784663214565359616
author Parmelee, Caitlyn
Moore, Samantha
Morrison, Katherine
Curto, Carina
author_facet Parmelee, Caitlyn
Moore, Samantha
Morrison, Katherine
Curto, Carina
author_sort Parmelee, Caitlyn
collection PubMed
description Combinatorial threshold-linear networks (CTLNs) are a special class of inhibition-dominated TLNs defined from directed graphs. Like more general TLNs, they display a wide variety of nonlinear dynamics including multistability, limit cycles, quasiperiodic attractors, and chaos. In prior work, we have developed a detailed mathematical theory relating stable and unstable fixed points of CTLNs to graph-theoretic properties of the underlying network. Here we find that a special type of fixed points, corresponding to core motifs, are predictive of both static and dynamic attractors. Moreover, the attractors can be found by choosing initial conditions that are small perturbations of these fixed points. This motivates us to hypothesize that dynamic attractors of a network correspond to unstable fixed points supported on core motifs. We tested this hypothesis on a large family of directed graphs of size n = 5, and found remarkable agreement. Furthermore, we discovered that core motifs with similar embeddings give rise to nearly identical attractors. This allowed us to classify attractors based on structurally-defined graph families. Our results suggest that graphical properties of the connectivity can be used to predict a network’s complex repertoire of nonlinear dynamics.
format Online
Article
Text
id pubmed-8896682
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-88966822022-03-05 Core motifs predict dynamic attractors in combinatorial threshold-linear networks Parmelee, Caitlyn Moore, Samantha Morrison, Katherine Curto, Carina PLoS One Research Article Combinatorial threshold-linear networks (CTLNs) are a special class of inhibition-dominated TLNs defined from directed graphs. Like more general TLNs, they display a wide variety of nonlinear dynamics including multistability, limit cycles, quasiperiodic attractors, and chaos. In prior work, we have developed a detailed mathematical theory relating stable and unstable fixed points of CTLNs to graph-theoretic properties of the underlying network. Here we find that a special type of fixed points, corresponding to core motifs, are predictive of both static and dynamic attractors. Moreover, the attractors can be found by choosing initial conditions that are small perturbations of these fixed points. This motivates us to hypothesize that dynamic attractors of a network correspond to unstable fixed points supported on core motifs. We tested this hypothesis on a large family of directed graphs of size n = 5, and found remarkable agreement. Furthermore, we discovered that core motifs with similar embeddings give rise to nearly identical attractors. This allowed us to classify attractors based on structurally-defined graph families. Our results suggest that graphical properties of the connectivity can be used to predict a network’s complex repertoire of nonlinear dynamics. Public Library of Science 2022-03-04 /pmc/articles/PMC8896682/ /pubmed/35245322 http://dx.doi.org/10.1371/journal.pone.0264456 Text en © 2022 Parmelee et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Parmelee, Caitlyn
Moore, Samantha
Morrison, Katherine
Curto, Carina
Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title_full Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title_fullStr Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title_full_unstemmed Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title_short Core motifs predict dynamic attractors in combinatorial threshold-linear networks
title_sort core motifs predict dynamic attractors in combinatorial threshold-linear networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8896682/
https://www.ncbi.nlm.nih.gov/pubmed/35245322
http://dx.doi.org/10.1371/journal.pone.0264456
work_keys_str_mv AT parmeleecaitlyn coremotifspredictdynamicattractorsincombinatorialthresholdlinearnetworks
AT mooresamantha coremotifspredictdynamicattractorsincombinatorialthresholdlinearnetworks
AT morrisonkatherine coremotifspredictdynamicattractorsincombinatorialthresholdlinearnetworks
AT curtocarina coremotifspredictdynamicattractorsincombinatorialthresholdlinearnetworks