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Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database

Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract...

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Autores principales: Gupta, Abhishek, Singh, Swikriti S., Mittal, Aarush M., Singh, Pranjul, Goyal, Shefali, Kannan, Karthikeyan R., Gupta, Arjit K., Gupta, Nitin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899409/
https://www.ncbi.nlm.nih.gov/pubmed/35265812
http://dx.doi.org/10.1016/j.isci.2022.103938
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author Gupta, Abhishek
Singh, Swikriti S.
Mittal, Aarush M.
Singh, Pranjul
Goyal, Shefali
Kannan, Karthikeyan R.
Gupta, Arjit K.
Gupta, Nitin
author_facet Gupta, Abhishek
Singh, Swikriti S.
Mittal, Aarush M.
Singh, Pranjul
Goyal, Shefali
Kannan, Karthikeyan R.
Gupta, Arjit K.
Gupta, Nitin
author_sort Gupta, Abhishek
collection PubMed
description Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract and standardize data for 12 mosquito species, along with Drosophila melanogaster for comparison, from over 170 studies and curate the Mosquito Olfactory Response Ensemble (MORE), publicly available at https://neuralsystems.github.io/MORE. We demonstrate the ability of MORE in generating biological insights by finding patterns across studies. Our analyses reveal that ORs are tuned to specific ranges of several physicochemical properties of odorants; the empty-neuron recording technique for measuring OR responses is more sensitive than the Xenopus oocyte technique; there are systematic differences in the behavioral preferences reported by different types of assays; and odorants tend to become less attractive or more aversive at higher concentrations.
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spelling pubmed-88994092022-03-08 Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database Gupta, Abhishek Singh, Swikriti S. Mittal, Aarush M. Singh, Pranjul Goyal, Shefali Kannan, Karthikeyan R. Gupta, Arjit K. Gupta, Nitin iScience Article Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract and standardize data for 12 mosquito species, along with Drosophila melanogaster for comparison, from over 170 studies and curate the Mosquito Olfactory Response Ensemble (MORE), publicly available at https://neuralsystems.github.io/MORE. We demonstrate the ability of MORE in generating biological insights by finding patterns across studies. Our analyses reveal that ORs are tuned to specific ranges of several physicochemical properties of odorants; the empty-neuron recording technique for measuring OR responses is more sensitive than the Xenopus oocyte technique; there are systematic differences in the behavioral preferences reported by different types of assays; and odorants tend to become less attractive or more aversive at higher concentrations. Elsevier 2022-02-17 /pmc/articles/PMC8899409/ /pubmed/35265812 http://dx.doi.org/10.1016/j.isci.2022.103938 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gupta, Abhishek
Singh, Swikriti S.
Mittal, Aarush M.
Singh, Pranjul
Goyal, Shefali
Kannan, Karthikeyan R.
Gupta, Arjit K.
Gupta, Nitin
Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title_full Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title_fullStr Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title_full_unstemmed Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title_short Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
title_sort mosquito olfactory response ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899409/
https://www.ncbi.nlm.nih.gov/pubmed/35265812
http://dx.doi.org/10.1016/j.isci.2022.103938
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