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Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database
Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899409/ https://www.ncbi.nlm.nih.gov/pubmed/35265812 http://dx.doi.org/10.1016/j.isci.2022.103938 |
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author | Gupta, Abhishek Singh, Swikriti S. Mittal, Aarush M. Singh, Pranjul Goyal, Shefali Kannan, Karthikeyan R. Gupta, Arjit K. Gupta, Nitin |
author_facet | Gupta, Abhishek Singh, Swikriti S. Mittal, Aarush M. Singh, Pranjul Goyal, Shefali Kannan, Karthikeyan R. Gupta, Arjit K. Gupta, Nitin |
author_sort | Gupta, Abhishek |
collection | PubMed |
description | Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract and standardize data for 12 mosquito species, along with Drosophila melanogaster for comparison, from over 170 studies and curate the Mosquito Olfactory Response Ensemble (MORE), publicly available at https://neuralsystems.github.io/MORE. We demonstrate the ability of MORE in generating biological insights by finding patterns across studies. Our analyses reveal that ORs are tuned to specific ranges of several physicochemical properties of odorants; the empty-neuron recording technique for measuring OR responses is more sensitive than the Xenopus oocyte technique; there are systematic differences in the behavioral preferences reported by different types of assays; and odorants tend to become less attractive or more aversive at higher concentrations. |
format | Online Article Text |
id | pubmed-8899409 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-88994092022-03-08 Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database Gupta, Abhishek Singh, Swikriti S. Mittal, Aarush M. Singh, Pranjul Goyal, Shefali Kannan, Karthikeyan R. Gupta, Arjit K. Gupta, Nitin iScience Article Many experimental studies have examined behavioral and electrophysiological responses of mosquitoes to odors. However, the differences across studies in data collection, processing, and reporting make it difficult to perform large-scale analyses combining data from multiple studies. Here we extract and standardize data for 12 mosquito species, along with Drosophila melanogaster for comparison, from over 170 studies and curate the Mosquito Olfactory Response Ensemble (MORE), publicly available at https://neuralsystems.github.io/MORE. We demonstrate the ability of MORE in generating biological insights by finding patterns across studies. Our analyses reveal that ORs are tuned to specific ranges of several physicochemical properties of odorants; the empty-neuron recording technique for measuring OR responses is more sensitive than the Xenopus oocyte technique; there are systematic differences in the behavioral preferences reported by different types of assays; and odorants tend to become less attractive or more aversive at higher concentrations. Elsevier 2022-02-17 /pmc/articles/PMC8899409/ /pubmed/35265812 http://dx.doi.org/10.1016/j.isci.2022.103938 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gupta, Abhishek Singh, Swikriti S. Mittal, Aarush M. Singh, Pranjul Goyal, Shefali Kannan, Karthikeyan R. Gupta, Arjit K. Gupta, Nitin Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title | Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title_full | Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title_fullStr | Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title_full_unstemmed | Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title_short | Mosquito Olfactory Response Ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
title_sort | mosquito olfactory response ensemble enables pattern discovery by curating a behavioral and electrophysiological response database |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899409/ https://www.ncbi.nlm.nih.gov/pubmed/35265812 http://dx.doi.org/10.1016/j.isci.2022.103938 |
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