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Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework
The venomous marine snails are conventionally divided into three groups, the cone snails (family Conidae), the auger snails (family Terebridae) and the turrids (formerly all assigned to a single family, Turridae). In this study, a library of venom peptides from species conventionally assigned to the...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899473/ https://www.ncbi.nlm.nih.gov/pubmed/35265668 http://dx.doi.org/10.3389/fmolb.2022.784419 |
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author | Chase, Kevin Watkins, Maren Safavi-Hemami, Helena Olivera, Baldomero M. |
author_facet | Chase, Kevin Watkins, Maren Safavi-Hemami, Helena Olivera, Baldomero M. |
author_sort | Chase, Kevin |
collection | PubMed |
description | The venomous marine snails are conventionally divided into three groups, the cone snails (family Conidae), the auger snails (family Terebridae) and the turrids (formerly all assigned to a single family, Turridae). In this study, a library of venom peptides from species conventionally assigned to the genus Turris was correlated to a phylogenetic analysis. Nucleotide sequences of multiple genes from transcriptomes were used to assess the phylogenetic relationships across a diverse set of species. The resulting tree shows that as conventionally defined, the conoidean genus Turris, is polyphyletic. We describe a new genus, Purpuraturris gen. nov., that comprises the outlier species. In addition to morphological distinctions, molecular data reveal that this group is divergent from Turris sensu stricto. The correlation between phylogenetic information and a family of peptide sequences was used to highlight those peptides mostly likely to be unique and intimately associated with biological diversity. The plethora of peptide sequences available requires two prioritization decisions: which subset of peptides to initially characterize, and after these are characterized, which to comprehensively investigate for potential biomedical applications such as drug developments. Life Science Identifiers: urn:lsid:zoobank.org; pub: 60D46561-28F0-4C39-BAC4-66DC8B4EAEA4 |
format | Online Article Text |
id | pubmed-8899473 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-88994732022-03-08 Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework Chase, Kevin Watkins, Maren Safavi-Hemami, Helena Olivera, Baldomero M. Front Mol Biosci Molecular Biosciences The venomous marine snails are conventionally divided into three groups, the cone snails (family Conidae), the auger snails (family Terebridae) and the turrids (formerly all assigned to a single family, Turridae). In this study, a library of venom peptides from species conventionally assigned to the genus Turris was correlated to a phylogenetic analysis. Nucleotide sequences of multiple genes from transcriptomes were used to assess the phylogenetic relationships across a diverse set of species. The resulting tree shows that as conventionally defined, the conoidean genus Turris, is polyphyletic. We describe a new genus, Purpuraturris gen. nov., that comprises the outlier species. In addition to morphological distinctions, molecular data reveal that this group is divergent from Turris sensu stricto. The correlation between phylogenetic information and a family of peptide sequences was used to highlight those peptides mostly likely to be unique and intimately associated with biological diversity. The plethora of peptide sequences available requires two prioritization decisions: which subset of peptides to initially characterize, and after these are characterized, which to comprehensively investigate for potential biomedical applications such as drug developments. Life Science Identifiers: urn:lsid:zoobank.org; pub: 60D46561-28F0-4C39-BAC4-66DC8B4EAEA4 Frontiers Media S.A. 2022-02-21 /pmc/articles/PMC8899473/ /pubmed/35265668 http://dx.doi.org/10.3389/fmolb.2022.784419 Text en Copyright © 2022 Chase, Watkins, Safavi-Hemami and Olivera. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Biosciences Chase, Kevin Watkins, Maren Safavi-Hemami, Helena Olivera, Baldomero M. Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title | Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title_full | Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title_fullStr | Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title_full_unstemmed | Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title_short | Integrating Venom Peptide Libraries Into a Phylogenetic and Broader Biological Framework |
title_sort | integrating venom peptide libraries into a phylogenetic and broader biological framework |
topic | Molecular Biosciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8899473/ https://www.ncbi.nlm.nih.gov/pubmed/35265668 http://dx.doi.org/10.3389/fmolb.2022.784419 |
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