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Lewis Structures from Open Quantum Systems Natural Orbitals: Real Space Adaptive Natural Density Partitioning
[Image: see text] Building chemical models from state-of-the-art electronic structure calculations is not an easy task, since the high-dimensional information contained in the wave function needs to be compressed and read in terms of the accepted chemical language. We have already shown (Phys. Chem....
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900138/ https://www.ncbi.nlm.nih.gov/pubmed/33909423 http://dx.doi.org/10.1021/acs.jpca.1c01689 |
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author | Francisco, Evelio Costales, Aurora Menéndez-Herrero, María Pendás, Ángel Martín |
author_facet | Francisco, Evelio Costales, Aurora Menéndez-Herrero, María Pendás, Ángel Martín |
author_sort | Francisco, Evelio |
collection | PubMed |
description | [Image: see text] Building chemical models from state-of-the-art electronic structure calculations is not an easy task, since the high-dimensional information contained in the wave function needs to be compressed and read in terms of the accepted chemical language. We have already shown (Phys. Chem. Chem. Phys.2018, 20, 2136830095829) how to access Lewis structures from general wave functions in real space by reformulating the adaptive natural density partitioning (AdNDP) method proposed by Zubarev and Boldyrev (Phys. Chem. Chem. Phys.2008, 10, 520718728862). This provides intuitive Lewis descriptions from fully orbital invariant position space descriptors but depends on not immediately accessible higher order cumulant density matrices. By using an open quantum systems (OQS) perspective, we here show that the rigorously defined OQS fragment natural orbitals can be used to build a consistent real space adaptive natural density partitioning based only on spatial information and the system’s one-particle density matrix. We show that this rs-AdNDP approach is a cheap, efficient, and robust technique that immerses electron counting arguments fully in the real space realm. |
format | Online Article Text |
id | pubmed-8900138 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-89001382022-03-08 Lewis Structures from Open Quantum Systems Natural Orbitals: Real Space Adaptive Natural Density Partitioning Francisco, Evelio Costales, Aurora Menéndez-Herrero, María Pendás, Ángel Martín J Phys Chem A [Image: see text] Building chemical models from state-of-the-art electronic structure calculations is not an easy task, since the high-dimensional information contained in the wave function needs to be compressed and read in terms of the accepted chemical language. We have already shown (Phys. Chem. Chem. Phys.2018, 20, 2136830095829) how to access Lewis structures from general wave functions in real space by reformulating the adaptive natural density partitioning (AdNDP) method proposed by Zubarev and Boldyrev (Phys. Chem. Chem. Phys.2008, 10, 520718728862). This provides intuitive Lewis descriptions from fully orbital invariant position space descriptors but depends on not immediately accessible higher order cumulant density matrices. By using an open quantum systems (OQS) perspective, we here show that the rigorously defined OQS fragment natural orbitals can be used to build a consistent real space adaptive natural density partitioning based only on spatial information and the system’s one-particle density matrix. We show that this rs-AdNDP approach is a cheap, efficient, and robust technique that immerses electron counting arguments fully in the real space realm. American Chemical Society 2021-04-28 2021-05-13 /pmc/articles/PMC8900138/ /pubmed/33909423 http://dx.doi.org/10.1021/acs.jpca.1c01689 Text en © 2021 American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Francisco, Evelio Costales, Aurora Menéndez-Herrero, María Pendás, Ángel Martín Lewis Structures from Open Quantum Systems Natural Orbitals: Real Space Adaptive Natural Density Partitioning |
title | Lewis Structures from Open
Quantum Systems Natural
Orbitals: Real Space Adaptive Natural Density Partitioning |
title_full | Lewis Structures from Open
Quantum Systems Natural
Orbitals: Real Space Adaptive Natural Density Partitioning |
title_fullStr | Lewis Structures from Open
Quantum Systems Natural
Orbitals: Real Space Adaptive Natural Density Partitioning |
title_full_unstemmed | Lewis Structures from Open
Quantum Systems Natural
Orbitals: Real Space Adaptive Natural Density Partitioning |
title_short | Lewis Structures from Open
Quantum Systems Natural
Orbitals: Real Space Adaptive Natural Density Partitioning |
title_sort | lewis structures from open
quantum systems natural
orbitals: real space adaptive natural density partitioning |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900138/ https://www.ncbi.nlm.nih.gov/pubmed/33909423 http://dx.doi.org/10.1021/acs.jpca.1c01689 |
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