Cargando…
Generation and network analysis of an RNA-seq transcriptional atlas for the rat
The laboratory rat is an important model for biomedical research. To generate a comprehensive rat transcriptomic atlas, we curated and downloaded 7700 rat RNA-seq datasets from public repositories, downsampled them to a common depth and quantified expression. Data from 585 rat tissues and cells, ave...
Autores principales: | Summers, Kim M, Bush, Stephen J, Wu, Chunlei, Hume, David A |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900154/ https://www.ncbi.nlm.nih.gov/pubmed/35265836 http://dx.doi.org/10.1093/nargab/lqac017 |
Ejemplares similares
-
Combination of novel and public RNA-seq datasets to generate an mRNA expression atlas for the domestic chicken
por: Bush, Stephen J., et al.
Publicado: (2018) -
Characterization of novel primary miRNA transcription units in human cells using Bru-seq nascent RNA sequencing
por: Bedi, Karan, et al.
Publicado: (2019) -
Joint single cell DNA-seq and RNA-seq of gastric cancer cell lines reveals rules of in vitro evolution
por: Andor, Noemi, et al.
Publicado: (2020) -
Single-cell gene set enrichment analysis and transfer learning for functional annotation of scRNA-seq data
por: Franchini, Melania, et al.
Publicado: (2023) -
TAGADA: a scalable pipeline to improve genome annotations with RNA-seq data
por: Kurylo, Cyril, et al.
Publicado: (2023)