Cargando…
Image features for quality analysis of thick blood smears employed in malaria diagnosis
BACKGROUND: The World Health Organization (WHO) provides protocols for the diagnosis of malaria. One of them is related to the staining process of blood samples to guarantee the correct parasite visualization. Ensuring the quality of the staining procedure on thick blood smears (TBS) is a difficult...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900337/ https://www.ncbi.nlm.nih.gov/pubmed/35255896 http://dx.doi.org/10.1186/s12936-022-04064-2 |
_version_ | 1784664092025290752 |
---|---|
author | Fong Amaris, W. M. Martinez, Carol Cortés-Cortés, Liliana J. Suárez, Daniel R. |
author_facet | Fong Amaris, W. M. Martinez, Carol Cortés-Cortés, Liliana J. Suárez, Daniel R. |
author_sort | Fong Amaris, W. M. |
collection | PubMed |
description | BACKGROUND: The World Health Organization (WHO) provides protocols for the diagnosis of malaria. One of them is related to the staining process of blood samples to guarantee the correct parasite visualization. Ensuring the quality of the staining procedure on thick blood smears (TBS) is a difficult task, especially in rural centres, where there are factors that can affect the smear quality (e.g. types of reagents employed, place of sample preparation, among others). This work presents an analysis of an image-based approach to evaluate the coloration quality of the staining process of TBS used for malaria diagnosis. METHODS: According to the WHO, there are different coloration quality descriptors of smears. Among those, the background colour is one of the best indicators of how well the staining process was conducted. An image database with 420 images (corresponding to 42 TBS samples) was created for analysing and testing image-based algorithms to detect the quality of the coloration of TBS. Background segmentation techniques were explored (based on RGB and HSV colour spaces) to separate the background and foreground (leukocytes, platelets, parasites) information. Then, different features (PCA, correlation, Histograms, variance) were explored as image criteria of coloration quality on the extracted background information; and evaluated according to their capability to classify images as with Good or Bad coloration quality from TBS. RESULTS: For background segmentation, a thresholding-based approach in the SV components of the HSV colour space was selected. It provided robustness separating the background information independently of its coloration quality. On the other hand, as image criteria of coloration quality, among the 19 feature vectors explored, the best one corresponds to the 15-bins histogram of the Hue component with classification rates of > 97%. CONCLUSIONS: An analysis of an image-based approach to describe the coloration quality of TBS was presented. It was demonstrated that if a robust background segmentation is conducted, the histogram of the H component from the HSV colour space is the best feature vector to discriminate the coloration quality of the smears. These results are the baseline for automating the estimation of the coloration quality, which has not been studied before, but that can be crucial for automating TBS’s analysis for assisting malaria diagnosis process. |
format | Online Article Text |
id | pubmed-8900337 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-89003372022-03-17 Image features for quality analysis of thick blood smears employed in malaria diagnosis Fong Amaris, W. M. Martinez, Carol Cortés-Cortés, Liliana J. Suárez, Daniel R. Malar J Research BACKGROUND: The World Health Organization (WHO) provides protocols for the diagnosis of malaria. One of them is related to the staining process of blood samples to guarantee the correct parasite visualization. Ensuring the quality of the staining procedure on thick blood smears (TBS) is a difficult task, especially in rural centres, where there are factors that can affect the smear quality (e.g. types of reagents employed, place of sample preparation, among others). This work presents an analysis of an image-based approach to evaluate the coloration quality of the staining process of TBS used for malaria diagnosis. METHODS: According to the WHO, there are different coloration quality descriptors of smears. Among those, the background colour is one of the best indicators of how well the staining process was conducted. An image database with 420 images (corresponding to 42 TBS samples) was created for analysing and testing image-based algorithms to detect the quality of the coloration of TBS. Background segmentation techniques were explored (based on RGB and HSV colour spaces) to separate the background and foreground (leukocytes, platelets, parasites) information. Then, different features (PCA, correlation, Histograms, variance) were explored as image criteria of coloration quality on the extracted background information; and evaluated according to their capability to classify images as with Good or Bad coloration quality from TBS. RESULTS: For background segmentation, a thresholding-based approach in the SV components of the HSV colour space was selected. It provided robustness separating the background information independently of its coloration quality. On the other hand, as image criteria of coloration quality, among the 19 feature vectors explored, the best one corresponds to the 15-bins histogram of the Hue component with classification rates of > 97%. CONCLUSIONS: An analysis of an image-based approach to describe the coloration quality of TBS was presented. It was demonstrated that if a robust background segmentation is conducted, the histogram of the H component from the HSV colour space is the best feature vector to discriminate the coloration quality of the smears. These results are the baseline for automating the estimation of the coloration quality, which has not been studied before, but that can be crucial for automating TBS’s analysis for assisting malaria diagnosis process. BioMed Central 2022-03-05 /pmc/articles/PMC8900337/ /pubmed/35255896 http://dx.doi.org/10.1186/s12936-022-04064-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Fong Amaris, W. M. Martinez, Carol Cortés-Cortés, Liliana J. Suárez, Daniel R. Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title | Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title_full | Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title_fullStr | Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title_full_unstemmed | Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title_short | Image features for quality analysis of thick blood smears employed in malaria diagnosis |
title_sort | image features for quality analysis of thick blood smears employed in malaria diagnosis |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900337/ https://www.ncbi.nlm.nih.gov/pubmed/35255896 http://dx.doi.org/10.1186/s12936-022-04064-2 |
work_keys_str_mv | AT fongamariswm imagefeaturesforqualityanalysisofthickbloodsmearsemployedinmalariadiagnosis AT martinezcarol imagefeaturesforqualityanalysisofthickbloodsmearsemployedinmalariadiagnosis AT cortescorteslilianaj imagefeaturesforqualityanalysisofthickbloodsmearsemployedinmalariadiagnosis AT suarezdanielr imagefeaturesforqualityanalysisofthickbloodsmearsemployedinmalariadiagnosis |