Cargando…

Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing

As a part of our study of the syntheses of aryl amides, the crystal structures of two benzamides were determined from single-crystal X-ray data at 173 K. Both crystal structures contain mol­ecular units as asymmetric units with no solvent in the unit cells. Crystal structure I, TFMP, is the result o...

Descripción completa

Detalles Bibliográficos
Autores principales: Pearson, Wayne H., Urban, Joseph J., MacArthur, Amy H. Roy, Lin, Shirley, Cabrera, Dylan W. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900516/
https://www.ncbi.nlm.nih.gov/pubmed/35371548
http://dx.doi.org/10.1107/S2056989022000950
_version_ 1784664137909927936
author Pearson, Wayne H.
Urban, Joseph J.
MacArthur, Amy H. Roy
Lin, Shirley
Cabrera, Dylan W. L.
author_facet Pearson, Wayne H.
Urban, Joseph J.
MacArthur, Amy H. Roy
Lin, Shirley
Cabrera, Dylan W. L.
author_sort Pearson, Wayne H.
collection PubMed
description As a part of our study of the syntheses of aryl amides, the crystal structures of two benzamides were determined from single-crystal X-ray data at 173 K. Both crystal structures contain mol­ecular units as asymmetric units with no solvent in the unit cells. Crystal structure I, TFMP, is the result of the crystallization of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide, C(14)H(10)F(3)NO. Crystal structure II, MOP, is composed of N-(4-meth­oxy­phen­yl)benzamide, C(14)H(13)NO(2), units. TFMP is triclinic, space group P [Image: see text] , consisting of two mol­ecules in the unit cell related by the center of symmetry. MOP is monoclinic, space group P2(1)/c, consisting of four mol­ecules in the unit cell. Both types of mol­ecules contain three planar regions; a phenyl ring, an amide planar region, and a para-substituted phenyl ring. The orientations of these planar regions within the asymmetric units are compared to their predicted orientations, in isolation, from DFT calculations. The aryl rings are tilted approximately 60° with respect to each other in both experimentally determined structures, as compared to 30° in the DFT results. These conformational changes result in more favorable environments for N—H⋯O hydrogen bonding and aryl ring π-stacking in the crystal structures. Inter­molecular inter­actions were examined by Hirshfeld surface analysis and qu­anti­fied by calculating mol­ecular inter­action energies. The results of this study demonstrate that both hydrogen bonding and dispersion are essential to the side-by-side stacking of mol­ecular units in these crystal structures. Weaker dispersion inter­actions along the axial directions of the mol­ecules reveal insight into the melting mechanisms of these crystals.
format Online
Article
Text
id pubmed-8900516
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-89005162022-03-31 Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing Pearson, Wayne H. Urban, Joseph J. MacArthur, Amy H. Roy Lin, Shirley Cabrera, Dylan W. L. Acta Crystallogr E Crystallogr Commun Research Communications As a part of our study of the syntheses of aryl amides, the crystal structures of two benzamides were determined from single-crystal X-ray data at 173 K. Both crystal structures contain mol­ecular units as asymmetric units with no solvent in the unit cells. Crystal structure I, TFMP, is the result of the crystallization of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide, C(14)H(10)F(3)NO. Crystal structure II, MOP, is composed of N-(4-meth­oxy­phen­yl)benzamide, C(14)H(13)NO(2), units. TFMP is triclinic, space group P [Image: see text] , consisting of two mol­ecules in the unit cell related by the center of symmetry. MOP is monoclinic, space group P2(1)/c, consisting of four mol­ecules in the unit cell. Both types of mol­ecules contain three planar regions; a phenyl ring, an amide planar region, and a para-substituted phenyl ring. The orientations of these planar regions within the asymmetric units are compared to their predicted orientations, in isolation, from DFT calculations. The aryl rings are tilted approximately 60° with respect to each other in both experimentally determined structures, as compared to 30° in the DFT results. These conformational changes result in more favorable environments for N—H⋯O hydrogen bonding and aryl ring π-stacking in the crystal structures. Inter­molecular inter­actions were examined by Hirshfeld surface analysis and qu­anti­fied by calculating mol­ecular inter­action energies. The results of this study demonstrate that both hydrogen bonding and dispersion are essential to the side-by-side stacking of mol­ecular units in these crystal structures. Weaker dispersion inter­actions along the axial directions of the mol­ecules reveal insight into the melting mechanisms of these crystals. International Union of Crystallography 2022-02-08 /pmc/articles/PMC8900516/ /pubmed/35371548 http://dx.doi.org/10.1107/S2056989022000950 Text en © Pearson et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Pearson, Wayne H.
Urban, Joseph J.
MacArthur, Amy H. Roy
Lin, Shirley
Cabrera, Dylan W. L.
Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title_full Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title_fullStr Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title_full_unstemmed Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title_short Crystal structures of N-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and N-(4-meth­oxy­phen­yl)benz­amide at 173 K: a study of the energetics of conformational changes due to crystal packing
title_sort crystal structures of n-[4-(tri­fluoro­meth­yl)phen­yl]benzamide and n-(4-meth­oxy­phen­yl)benz­amide at 173 k: a study of the energetics of conformational changes due to crystal packing
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900516/
https://www.ncbi.nlm.nih.gov/pubmed/35371548
http://dx.doi.org/10.1107/S2056989022000950
work_keys_str_mv AT pearsonwayneh crystalstructuresofn4trifluoromethylphenylbenzamideandn4methoxyphenylbenzamideat173kastudyoftheenergeticsofconformationalchangesduetocrystalpacking
AT urbanjosephj crystalstructuresofn4trifluoromethylphenylbenzamideandn4methoxyphenylbenzamideat173kastudyoftheenergeticsofconformationalchangesduetocrystalpacking
AT macarthuramyhroy crystalstructuresofn4trifluoromethylphenylbenzamideandn4methoxyphenylbenzamideat173kastudyoftheenergeticsofconformationalchangesduetocrystalpacking
AT linshirley crystalstructuresofn4trifluoromethylphenylbenzamideandn4methoxyphenylbenzamideat173kastudyoftheenergeticsofconformationalchangesduetocrystalpacking
AT cabreradylanwl crystalstructuresofn4trifluoromethylphenylbenzamideandn4methoxyphenylbenzamideat173kastudyoftheenergeticsofconformationalchangesduetocrystalpacking