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Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis

BACKGROUND: Oral squamous cell carcinoma (OSCC) is one of the most prevalent malignancies worldwide. More recently, the administration of immune checkpoint inhibitors has opened up more possibilities for cancer treatment. METHODS: We utilized a weighted gene co-expression network and the single samp...

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Autores principales: Wang, Chao, Chen, Zhihong, Yang, Xueming, Zhang, Wei, Zhou, Junbo, Zhang, Hongchuang, Ding, Xu, Ye, Jinhai, Wu, Heming, Wu, Yunong, Zheng, Yang, Song, Xiaomeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900811/
https://www.ncbi.nlm.nih.gov/pubmed/35264874
http://dx.doi.org/10.2147/IJGM.S349379
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author Wang, Chao
Chen, Zhihong
Yang, Xueming
Zhang, Wei
Zhou, Junbo
Zhang, Hongchuang
Ding, Xu
Ye, Jinhai
Wu, Heming
Wu, Yunong
Zheng, Yang
Song, Xiaomeng
author_facet Wang, Chao
Chen, Zhihong
Yang, Xueming
Zhang, Wei
Zhou, Junbo
Zhang, Hongchuang
Ding, Xu
Ye, Jinhai
Wu, Heming
Wu, Yunong
Zheng, Yang
Song, Xiaomeng
author_sort Wang, Chao
collection PubMed
description BACKGROUND: Oral squamous cell carcinoma (OSCC) is one of the most prevalent malignancies worldwide. More recently, the administration of immune checkpoint inhibitors has opened up more possibilities for cancer treatment. METHODS: We utilized a weighted gene co-expression network and the single sample gene set enrichment analysis (ssGSEA) algorithm in the TCGA database and identified a module highly correlated with regulatory T cell (Treg) abundance in OSCC. Subsequently, we verified the results by tissue microarrays and utilized immunohistochemical staining (IHC) to test the relationship between the expression level and clinicopathological staging. CCK-8, transwell, and wound healing assays were utilized to detect the functions of OSCC cells. RESULTS: LCK, IL10RA, and TNFRSF1B were selected as biomarkers related to regulatory T cell infiltration. IHC staining showed significantly increased expression of LCK, IL10RA or TNFRSF1B in OSCC patients, and the expression levels were associated with tumor stage, lymph node metastasis, pathological stage, clinical status and the overall survival. In vitro experiments showed that LCK, IL10RA or TNFRSF1B knockdown efficiently impaired the proliferative, migrative, and invasive capacity in OSCC cell lines. CONCLUSION: We performed a series of bioinformatics analyses in OSCC and identified three oncogenic indicators: LCK, IL10RA, TNFRSF1B. These findings uncovered the potential prognostic values of hub genes, thus laying foundations for in-depth research in OSCC.
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spelling pubmed-89008112022-03-08 Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis Wang, Chao Chen, Zhihong Yang, Xueming Zhang, Wei Zhou, Junbo Zhang, Hongchuang Ding, Xu Ye, Jinhai Wu, Heming Wu, Yunong Zheng, Yang Song, Xiaomeng Int J Gen Med Original Research BACKGROUND: Oral squamous cell carcinoma (OSCC) is one of the most prevalent malignancies worldwide. More recently, the administration of immune checkpoint inhibitors has opened up more possibilities for cancer treatment. METHODS: We utilized a weighted gene co-expression network and the single sample gene set enrichment analysis (ssGSEA) algorithm in the TCGA database and identified a module highly correlated with regulatory T cell (Treg) abundance in OSCC. Subsequently, we verified the results by tissue microarrays and utilized immunohistochemical staining (IHC) to test the relationship between the expression level and clinicopathological staging. CCK-8, transwell, and wound healing assays were utilized to detect the functions of OSCC cells. RESULTS: LCK, IL10RA, and TNFRSF1B were selected as biomarkers related to regulatory T cell infiltration. IHC staining showed significantly increased expression of LCK, IL10RA or TNFRSF1B in OSCC patients, and the expression levels were associated with tumor stage, lymph node metastasis, pathological stage, clinical status and the overall survival. In vitro experiments showed that LCK, IL10RA or TNFRSF1B knockdown efficiently impaired the proliferative, migrative, and invasive capacity in OSCC cell lines. CONCLUSION: We performed a series of bioinformatics analyses in OSCC and identified three oncogenic indicators: LCK, IL10RA, TNFRSF1B. These findings uncovered the potential prognostic values of hub genes, thus laying foundations for in-depth research in OSCC. Dove 2022-03-02 /pmc/articles/PMC8900811/ /pubmed/35264874 http://dx.doi.org/10.2147/IJGM.S349379 Text en © 2022 Wang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Wang, Chao
Chen, Zhihong
Yang, Xueming
Zhang, Wei
Zhou, Junbo
Zhang, Hongchuang
Ding, Xu
Ye, Jinhai
Wu, Heming
Wu, Yunong
Zheng, Yang
Song, Xiaomeng
Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title_full Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title_fullStr Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title_full_unstemmed Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title_short Identification of Biomarkers Related to Regulatory T Cell Infiltration in Oral Squamous Cell Carcinoma Based on Integrated Bioinformatics Analysis
title_sort identification of biomarkers related to regulatory t cell infiltration in oral squamous cell carcinoma based on integrated bioinformatics analysis
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8900811/
https://www.ncbi.nlm.nih.gov/pubmed/35264874
http://dx.doi.org/10.2147/IJGM.S349379
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