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What is the Sugar Code?
A code is defined by the nature of the symbols, which are used to generate information‐storing combinations (e. g. oligo‐ and polymers). Like nucleic acids and proteins, oligo‐ and polysaccharides are ubiquitous, and they are a biochemical platform for establishing molecular messages. Of note, the l...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8901795/ https://www.ncbi.nlm.nih.gov/pubmed/34496130 http://dx.doi.org/10.1002/cbic.202100327 |
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author | Gabius, Hans‐Joachim Cudic, Maré Diercks, Tammo Kaltner, Herbert Kopitz, Jürgen Mayo, Kevin H. Murphy, Paul V. Oscarson, Stefan Roy, René Schedlbauer, Andreas Toegel, Stefan Romero, Antonio |
author_facet | Gabius, Hans‐Joachim Cudic, Maré Diercks, Tammo Kaltner, Herbert Kopitz, Jürgen Mayo, Kevin H. Murphy, Paul V. Oscarson, Stefan Roy, René Schedlbauer, Andreas Toegel, Stefan Romero, Antonio |
author_sort | Gabius, Hans‐Joachim |
collection | PubMed |
description | A code is defined by the nature of the symbols, which are used to generate information‐storing combinations (e. g. oligo‐ and polymers). Like nucleic acids and proteins, oligo‐ and polysaccharides are ubiquitous, and they are a biochemical platform for establishing molecular messages. Of note, the letters of the sugar code system (third alphabet of life) excel in coding capacity by making an unsurpassed versatility for isomer (code word) formation possible by variability in anomery and linkage position of the glycosidic bond, ring size and branching. The enzymatic machinery for glycan biosynthesis (writers) realizes this enormous potential for building a large vocabulary. It includes possibilities for dynamic editing/erasing as known from nucleic acids and proteins. Matching the glycome diversity, a large panel of sugar receptors (lectins) has developed based on more than a dozen folds. Lectins ‘read’ the glycan‐encoded information. Hydrogen/coordination bonding and ionic pairing together with stacking and C−H/π‐interactions as well as modes of spatial glycan presentation underlie the selectivity and specificity of glycan‐lectin recognition. Modular design of lectins together with glycan display and the nature of the cognate glycoconjugate account for the large number of post‐binding events. They give an entry to the glycan vocabulary its functional, often context‐dependent meaning(s), hereby building the dictionary of the sugar code. |
format | Online Article Text |
id | pubmed-8901795 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89017952022-10-14 What is the Sugar Code? Gabius, Hans‐Joachim Cudic, Maré Diercks, Tammo Kaltner, Herbert Kopitz, Jürgen Mayo, Kevin H. Murphy, Paul V. Oscarson, Stefan Roy, René Schedlbauer, Andreas Toegel, Stefan Romero, Antonio Chembiochem Reviews A code is defined by the nature of the symbols, which are used to generate information‐storing combinations (e. g. oligo‐ and polymers). Like nucleic acids and proteins, oligo‐ and polysaccharides are ubiquitous, and they are a biochemical platform for establishing molecular messages. Of note, the letters of the sugar code system (third alphabet of life) excel in coding capacity by making an unsurpassed versatility for isomer (code word) formation possible by variability in anomery and linkage position of the glycosidic bond, ring size and branching. The enzymatic machinery for glycan biosynthesis (writers) realizes this enormous potential for building a large vocabulary. It includes possibilities for dynamic editing/erasing as known from nucleic acids and proteins. Matching the glycome diversity, a large panel of sugar receptors (lectins) has developed based on more than a dozen folds. Lectins ‘read’ the glycan‐encoded information. Hydrogen/coordination bonding and ionic pairing together with stacking and C−H/π‐interactions as well as modes of spatial glycan presentation underlie the selectivity and specificity of glycan‐lectin recognition. Modular design of lectins together with glycan display and the nature of the cognate glycoconjugate account for the large number of post‐binding events. They give an entry to the glycan vocabulary its functional, often context‐dependent meaning(s), hereby building the dictionary of the sugar code. John Wiley and Sons Inc. 2021-09-22 2022-07-05 /pmc/articles/PMC8901795/ /pubmed/34496130 http://dx.doi.org/10.1002/cbic.202100327 Text en © 2021 The Authors. ChemBioChem published by Wiley-VCH GmbH https://creativecommons.org/licenses/by-nc/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | Reviews Gabius, Hans‐Joachim Cudic, Maré Diercks, Tammo Kaltner, Herbert Kopitz, Jürgen Mayo, Kevin H. Murphy, Paul V. Oscarson, Stefan Roy, René Schedlbauer, Andreas Toegel, Stefan Romero, Antonio What is the Sugar Code? |
title | What is the Sugar Code? |
title_full | What is the Sugar Code? |
title_fullStr | What is the Sugar Code? |
title_full_unstemmed | What is the Sugar Code? |
title_short | What is the Sugar Code? |
title_sort | what is the sugar code? |
topic | Reviews |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8901795/ https://www.ncbi.nlm.nih.gov/pubmed/34496130 http://dx.doi.org/10.1002/cbic.202100327 |
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