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Classification of Mouse Lung Metastatic Tumor with Deep Learning
Traditionally, pathologists microscopically examine tissue sections to detect pathological lesions; the many slides that must be evaluated impose severe work burdens. Also, diagnostic accuracy varies by pathologist training and experience; better diagnostic tools are required. Given the rapid develo...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Korean Society of Applied Pharmacology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8902456/ https://www.ncbi.nlm.nih.gov/pubmed/34725310 http://dx.doi.org/10.4062/biomolther.2021.130 |
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author | Lee, Ha Neul Seo, Hong-Deok Kim, Eui-Myoung Han, Beom Seok Kang, Jin Seok |
author_facet | Lee, Ha Neul Seo, Hong-Deok Kim, Eui-Myoung Han, Beom Seok Kang, Jin Seok |
author_sort | Lee, Ha Neul |
collection | PubMed |
description | Traditionally, pathologists microscopically examine tissue sections to detect pathological lesions; the many slides that must be evaluated impose severe work burdens. Also, diagnostic accuracy varies by pathologist training and experience; better diagnostic tools are required. Given the rapid development of computer vision, automated deep learning is now used to classify microscopic images, including medical images. Here, we used a Inception-v3 deep learning model to detect mouse lung metastatic tumors via whole slide imaging (WSI); we cropped the images to 151 by 151 pixels. The images were divided into training (53.8%) and test (46.2%) sets (21,017 and 18,016 images, respectively). When images from lung tissue containing tumor tissues were evaluated, the model accuracy was 98.76%. When images from normal lung tissue were evaluated, the model accuracy (“no tumor”) was 99.87%. Thus, the deep learning model distinguished metastatic lesions from normal lung tissue. Our approach will allow the rapid and accurate analysis of various tissues. |
format | Online Article Text |
id | pubmed-8902456 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Korean Society of Applied Pharmacology |
record_format | MEDLINE/PubMed |
spelling | pubmed-89024562022-03-09 Classification of Mouse Lung Metastatic Tumor with Deep Learning Lee, Ha Neul Seo, Hong-Deok Kim, Eui-Myoung Han, Beom Seok Kang, Jin Seok Biomol Ther (Seoul) Original Article Traditionally, pathologists microscopically examine tissue sections to detect pathological lesions; the many slides that must be evaluated impose severe work burdens. Also, diagnostic accuracy varies by pathologist training and experience; better diagnostic tools are required. Given the rapid development of computer vision, automated deep learning is now used to classify microscopic images, including medical images. Here, we used a Inception-v3 deep learning model to detect mouse lung metastatic tumors via whole slide imaging (WSI); we cropped the images to 151 by 151 pixels. The images were divided into training (53.8%) and test (46.2%) sets (21,017 and 18,016 images, respectively). When images from lung tissue containing tumor tissues were evaluated, the model accuracy was 98.76%. When images from normal lung tissue were evaluated, the model accuracy (“no tumor”) was 99.87%. Thus, the deep learning model distinguished metastatic lesions from normal lung tissue. Our approach will allow the rapid and accurate analysis of various tissues. The Korean Society of Applied Pharmacology 2022-03-01 2021-11-02 /pmc/articles/PMC8902456/ /pubmed/34725310 http://dx.doi.org/10.4062/biomolther.2021.130 Text en Copyright © 2022, The Korean Society of Applied Pharmacology https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0 (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Lee, Ha Neul Seo, Hong-Deok Kim, Eui-Myoung Han, Beom Seok Kang, Jin Seok Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title | Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title_full | Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title_fullStr | Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title_full_unstemmed | Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title_short | Classification of Mouse Lung Metastatic Tumor with Deep Learning |
title_sort | classification of mouse lung metastatic tumor with deep learning |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8902456/ https://www.ncbi.nlm.nih.gov/pubmed/34725310 http://dx.doi.org/10.4062/biomolther.2021.130 |
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