Cargando…

Classical mathematical models for prediction of response to chemotherapy and immunotherapy

Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a rang...

Descripción completa

Detalles Bibliográficos
Autores principales: Ghaffari Laleh, Narmin, Loeffler, Chiara Maria Lavinia, Grajek, Julia, Staňková, Kateřina, Pearson, Alexander T., Muti, Hannah Sophie, Trautwein, Christian, Enderling, Heiko, Poleszczuk, Jan, Kather, Jakob Nikolas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8903251/
https://www.ncbi.nlm.nih.gov/pubmed/35120124
http://dx.doi.org/10.1371/journal.pcbi.1009822
_version_ 1784664719435497472
author Ghaffari Laleh, Narmin
Loeffler, Chiara Maria Lavinia
Grajek, Julia
Staňková, Kateřina
Pearson, Alexander T.
Muti, Hannah Sophie
Trautwein, Christian
Enderling, Heiko
Poleszczuk, Jan
Kather, Jakob Nikolas
author_facet Ghaffari Laleh, Narmin
Loeffler, Chiara Maria Lavinia
Grajek, Julia
Staňková, Kateřina
Pearson, Alexander T.
Muti, Hannah Sophie
Trautwein, Christian
Enderling, Heiko
Poleszczuk, Jan
Kather, Jakob Nikolas
author_sort Ghaffari Laleh, Narmin
collection PubMed
description Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a range of differential equation models to tumor volume measurements of patients undergoing chemotherapy or cancer immunotherapy for solid tumors. We used a large dataset of 1472 patients with three or more measurements per target lesion, of which 652 patients had six or more data points. We show that the early treatment response shows only moderate correlation with the final treatment response, demonstrating the need for nuanced models. We then perform a head-to-head comparison of six classical models which are widely used in the field: the Exponential, Logistic, Classic Bertalanffy, General Bertalanffy, Classic Gompertz and General Gompertz model. Several models provide a good fit to tumor volume measurements, with the Gompertz model providing the best balance between goodness of fit and number of parameters. Similarly, when fitting to early treatment data, the general Bertalanffy and Gompertz models yield the lowest mean absolute error to forecasted data, indicating that these models could potentially be effective at predicting treatment outcome. In summary, we provide a quantitative benchmark for classical textbook models and state-of-the art models of human tumor growth. We publicly release an anonymized version of our original data, providing the first benchmark set of human tumor growth data for evaluation of mathematical models.
format Online
Article
Text
id pubmed-8903251
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-89032512022-03-09 Classical mathematical models for prediction of response to chemotherapy and immunotherapy Ghaffari Laleh, Narmin Loeffler, Chiara Maria Lavinia Grajek, Julia Staňková, Kateřina Pearson, Alexander T. Muti, Hannah Sophie Trautwein, Christian Enderling, Heiko Poleszczuk, Jan Kather, Jakob Nikolas PLoS Comput Biol Research Article Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a range of differential equation models to tumor volume measurements of patients undergoing chemotherapy or cancer immunotherapy for solid tumors. We used a large dataset of 1472 patients with three or more measurements per target lesion, of which 652 patients had six or more data points. We show that the early treatment response shows only moderate correlation with the final treatment response, demonstrating the need for nuanced models. We then perform a head-to-head comparison of six classical models which are widely used in the field: the Exponential, Logistic, Classic Bertalanffy, General Bertalanffy, Classic Gompertz and General Gompertz model. Several models provide a good fit to tumor volume measurements, with the Gompertz model providing the best balance between goodness of fit and number of parameters. Similarly, when fitting to early treatment data, the general Bertalanffy and Gompertz models yield the lowest mean absolute error to forecasted data, indicating that these models could potentially be effective at predicting treatment outcome. In summary, we provide a quantitative benchmark for classical textbook models and state-of-the art models of human tumor growth. We publicly release an anonymized version of our original data, providing the first benchmark set of human tumor growth data for evaluation of mathematical models. Public Library of Science 2022-02-04 /pmc/articles/PMC8903251/ /pubmed/35120124 http://dx.doi.org/10.1371/journal.pcbi.1009822 Text en © 2022 Ghaffari Laleh et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ghaffari Laleh, Narmin
Loeffler, Chiara Maria Lavinia
Grajek, Julia
Staňková, Kateřina
Pearson, Alexander T.
Muti, Hannah Sophie
Trautwein, Christian
Enderling, Heiko
Poleszczuk, Jan
Kather, Jakob Nikolas
Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title_full Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title_fullStr Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title_full_unstemmed Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title_short Classical mathematical models for prediction of response to chemotherapy and immunotherapy
title_sort classical mathematical models for prediction of response to chemotherapy and immunotherapy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8903251/
https://www.ncbi.nlm.nih.gov/pubmed/35120124
http://dx.doi.org/10.1371/journal.pcbi.1009822
work_keys_str_mv AT ghaffarilalehnarmin classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT loefflerchiaramarialavinia classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT grajekjulia classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT stankovakaterina classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT pearsonalexandert classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT mutihannahsophie classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT trautweinchristian classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT enderlingheiko classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT poleszczukjan classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy
AT katherjakobnikolas classicalmathematicalmodelsforpredictionofresponsetochemotherapyandimmunotherapy