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Classical mathematical models for prediction of response to chemotherapy and immunotherapy
Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a rang...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8903251/ https://www.ncbi.nlm.nih.gov/pubmed/35120124 http://dx.doi.org/10.1371/journal.pcbi.1009822 |
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author | Ghaffari Laleh, Narmin Loeffler, Chiara Maria Lavinia Grajek, Julia Staňková, Kateřina Pearson, Alexander T. Muti, Hannah Sophie Trautwein, Christian Enderling, Heiko Poleszczuk, Jan Kather, Jakob Nikolas |
author_facet | Ghaffari Laleh, Narmin Loeffler, Chiara Maria Lavinia Grajek, Julia Staňková, Kateřina Pearson, Alexander T. Muti, Hannah Sophie Trautwein, Christian Enderling, Heiko Poleszczuk, Jan Kather, Jakob Nikolas |
author_sort | Ghaffari Laleh, Narmin |
collection | PubMed |
description | Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a range of differential equation models to tumor volume measurements of patients undergoing chemotherapy or cancer immunotherapy for solid tumors. We used a large dataset of 1472 patients with three or more measurements per target lesion, of which 652 patients had six or more data points. We show that the early treatment response shows only moderate correlation with the final treatment response, demonstrating the need for nuanced models. We then perform a head-to-head comparison of six classical models which are widely used in the field: the Exponential, Logistic, Classic Bertalanffy, General Bertalanffy, Classic Gompertz and General Gompertz model. Several models provide a good fit to tumor volume measurements, with the Gompertz model providing the best balance between goodness of fit and number of parameters. Similarly, when fitting to early treatment data, the general Bertalanffy and Gompertz models yield the lowest mean absolute error to forecasted data, indicating that these models could potentially be effective at predicting treatment outcome. In summary, we provide a quantitative benchmark for classical textbook models and state-of-the art models of human tumor growth. We publicly release an anonymized version of our original data, providing the first benchmark set of human tumor growth data for evaluation of mathematical models. |
format | Online Article Text |
id | pubmed-8903251 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-89032512022-03-09 Classical mathematical models for prediction of response to chemotherapy and immunotherapy Ghaffari Laleh, Narmin Loeffler, Chiara Maria Lavinia Grajek, Julia Staňková, Kateřina Pearson, Alexander T. Muti, Hannah Sophie Trautwein, Christian Enderling, Heiko Poleszczuk, Jan Kather, Jakob Nikolas PLoS Comput Biol Research Article Classical mathematical models of tumor growth have shaped our understanding of cancer and have broad practical implications for treatment scheduling and dosage. However, even the simplest textbook models have been barely validated in real world-data of human patients. In this study, we fitted a range of differential equation models to tumor volume measurements of patients undergoing chemotherapy or cancer immunotherapy for solid tumors. We used a large dataset of 1472 patients with three or more measurements per target lesion, of which 652 patients had six or more data points. We show that the early treatment response shows only moderate correlation with the final treatment response, demonstrating the need for nuanced models. We then perform a head-to-head comparison of six classical models which are widely used in the field: the Exponential, Logistic, Classic Bertalanffy, General Bertalanffy, Classic Gompertz and General Gompertz model. Several models provide a good fit to tumor volume measurements, with the Gompertz model providing the best balance between goodness of fit and number of parameters. Similarly, when fitting to early treatment data, the general Bertalanffy and Gompertz models yield the lowest mean absolute error to forecasted data, indicating that these models could potentially be effective at predicting treatment outcome. In summary, we provide a quantitative benchmark for classical textbook models and state-of-the art models of human tumor growth. We publicly release an anonymized version of our original data, providing the first benchmark set of human tumor growth data for evaluation of mathematical models. Public Library of Science 2022-02-04 /pmc/articles/PMC8903251/ /pubmed/35120124 http://dx.doi.org/10.1371/journal.pcbi.1009822 Text en © 2022 Ghaffari Laleh et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ghaffari Laleh, Narmin Loeffler, Chiara Maria Lavinia Grajek, Julia Staňková, Kateřina Pearson, Alexander T. Muti, Hannah Sophie Trautwein, Christian Enderling, Heiko Poleszczuk, Jan Kather, Jakob Nikolas Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title | Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title_full | Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title_fullStr | Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title_full_unstemmed | Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title_short | Classical mathematical models for prediction of response to chemotherapy and immunotherapy |
title_sort | classical mathematical models for prediction of response to chemotherapy and immunotherapy |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8903251/ https://www.ncbi.nlm.nih.gov/pubmed/35120124 http://dx.doi.org/10.1371/journal.pcbi.1009822 |
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