Cargando…
Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis
Autism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by impaired social interaction and restricted, repetitive behavior. Multiple studies have suggested mitochondrial dysfunction, glutamate excitotoxicity, and impaired detoxification mechanism as accepted etiological mechani...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8904630/ https://www.ncbi.nlm.nih.gov/pubmed/35260688 http://dx.doi.org/10.1038/s41598-022-07829-6 |
_version_ | 1784664997572378624 |
---|---|
author | Hassan, Wail M. Al-Dbass, Abeer Al-Ayadhi, Laila Bhat, Ramesa Shafi El-Ansary, Afaf |
author_facet | Hassan, Wail M. Al-Dbass, Abeer Al-Ayadhi, Laila Bhat, Ramesa Shafi El-Ansary, Afaf |
author_sort | Hassan, Wail M. |
collection | PubMed |
description | Autism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by impaired social interaction and restricted, repetitive behavior. Multiple studies have suggested mitochondrial dysfunction, glutamate excitotoxicity, and impaired detoxification mechanism as accepted etiological mechanisms of ASD that can be targeted for therapeutic intervention. In the current study, blood samples were collected from 40 people with autism and 40 control participants after informed consent and full approval from the Institutional Review Board of King Saud University. Sodium (Na(+)), Potassium (K(+)), lactate dehydrogenase (LDH), glutathione-s-transferase (GST), and mitochondrial respiratory chain complex I (MRC1) were measured in plasma of both groups. Predictive models were established to discriminate individuals with ASD from controls. The predictive power of these five variables, individually and in combination, was compared using the area under a ROC curve (AUC). We compared the performance of principal component analysis (PCA), discriminant analysis (DA), and binary logistic regression (BLR) as ways to combine single variables and create the predictive models. K(+) had the highest AUC (0.801) of any single variable, followed by GST, LDH, Na(+), and MRC1, respectively. Combining the five variables resulted in higher AUCs than those obtained using single variables across all models. Both DA and BLR were superior to PCA and comparable to each other. In our study, the combination of Na(+), K(+), LDH, GST, and MRC1 showed the highest promise in discriminating individuals with autism from controls. These results provide a platform that can potentially be used to verify the efficacy of our models with a larger sample size or evaluate other biomarkers. |
format | Online Article Text |
id | pubmed-8904630 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89046302022-03-09 Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis Hassan, Wail M. Al-Dbass, Abeer Al-Ayadhi, Laila Bhat, Ramesa Shafi El-Ansary, Afaf Sci Rep Article Autism spectrum disorder (ASD) is a neurodevelopmental disorder characterized by impaired social interaction and restricted, repetitive behavior. Multiple studies have suggested mitochondrial dysfunction, glutamate excitotoxicity, and impaired detoxification mechanism as accepted etiological mechanisms of ASD that can be targeted for therapeutic intervention. In the current study, blood samples were collected from 40 people with autism and 40 control participants after informed consent and full approval from the Institutional Review Board of King Saud University. Sodium (Na(+)), Potassium (K(+)), lactate dehydrogenase (LDH), glutathione-s-transferase (GST), and mitochondrial respiratory chain complex I (MRC1) were measured in plasma of both groups. Predictive models were established to discriminate individuals with ASD from controls. The predictive power of these five variables, individually and in combination, was compared using the area under a ROC curve (AUC). We compared the performance of principal component analysis (PCA), discriminant analysis (DA), and binary logistic regression (BLR) as ways to combine single variables and create the predictive models. K(+) had the highest AUC (0.801) of any single variable, followed by GST, LDH, Na(+), and MRC1, respectively. Combining the five variables resulted in higher AUCs than those obtained using single variables across all models. Both DA and BLR were superior to PCA and comparable to each other. In our study, the combination of Na(+), K(+), LDH, GST, and MRC1 showed the highest promise in discriminating individuals with autism from controls. These results provide a platform that can potentially be used to verify the efficacy of our models with a larger sample size or evaluate other biomarkers. Nature Publishing Group UK 2022-03-08 /pmc/articles/PMC8904630/ /pubmed/35260688 http://dx.doi.org/10.1038/s41598-022-07829-6 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Hassan, Wail M. Al-Dbass, Abeer Al-Ayadhi, Laila Bhat, Ramesa Shafi El-Ansary, Afaf Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title | Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title_full | Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title_fullStr | Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title_full_unstemmed | Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title_short | Discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
title_sort | discriminant analysis and binary logistic regression enable more accurate prediction of autism spectrum disorder than principal component analysis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8904630/ https://www.ncbi.nlm.nih.gov/pubmed/35260688 http://dx.doi.org/10.1038/s41598-022-07829-6 |
work_keys_str_mv | AT hassanwailm discriminantanalysisandbinarylogisticregressionenablemoreaccuratepredictionofautismspectrumdisorderthanprincipalcomponentanalysis AT aldbassabeer discriminantanalysisandbinarylogisticregressionenablemoreaccuratepredictionofautismspectrumdisorderthanprincipalcomponentanalysis AT alayadhilaila discriminantanalysisandbinarylogisticregressionenablemoreaccuratepredictionofautismspectrumdisorderthanprincipalcomponentanalysis AT bhatramesashafi discriminantanalysisandbinarylogisticregressionenablemoreaccuratepredictionofautismspectrumdisorderthanprincipalcomponentanalysis AT elansaryafaf discriminantanalysisandbinarylogisticregressionenablemoreaccuratepredictionofautismspectrumdisorderthanprincipalcomponentanalysis |