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Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China

Soil microorganisms play key roles in biogeochemical cycling in forest ecosystems. However, whether the responses of microbial community with stand development differed in rhizosphere and bulk soils remains unknown. We collected rhizosphere and bulk soil in Chinese fir plantations with different sta...

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Autores principales: Wang, Yuzhe, Jiao, Pengyu, Guo, Wen, Du, Dajun, Hu, Yalin, Tan, Xiang, Liu, Xian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8904968/
https://www.ncbi.nlm.nih.gov/pubmed/35281312
http://dx.doi.org/10.3389/fmicb.2021.777862
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author Wang, Yuzhe
Jiao, Pengyu
Guo, Wen
Du, Dajun
Hu, Yalin
Tan, Xiang
Liu, Xian
author_facet Wang, Yuzhe
Jiao, Pengyu
Guo, Wen
Du, Dajun
Hu, Yalin
Tan, Xiang
Liu, Xian
author_sort Wang, Yuzhe
collection PubMed
description Soil microorganisms play key roles in biogeochemical cycling in forest ecosystems. However, whether the responses of microbial community with stand development differed in rhizosphere and bulk soils remains unknown. We collected rhizosphere and bulk soil in Chinese fir plantations with different stand ages (7a, 15a, 24a, and 34a) in subtropical China, and determined bacterial and fungal community variation via high-throughput sequencing. The results showed that soil bacterial, but not fungal, community diversity significantly differed among stand ages and between rhizosphere and bulk soils (p < 0.05). The differences in Shannon–Wiener and Simpson’s indices between rhizosphere and bulk soil varied with stand age, with significant higher soil bacterial diversity in rhizosphere than bulk soils in 7a and 34a plantations (p < 0.05), but there were no significant difference in soil bacterial diversity between rhizosphere and bulk soils in 15a and 24a plantations (p > 0.05). Soil microbial community composition varied significantly with stand age but not between the rhizosphere and bulk soil. The dominant bacterial phyla at all ages were Acidobacteria and Proteobacteria, while the dominant fungal phyla were Ascomycota and Basidiomycota in both rhizosphere and bulk soil. They showed inconsistent distribution patterns along stand age gradient (7–34a) in the rhizosphere and bulk soil, suggesting distinct ecological strategy (r-strategist vs. k-strategist) of different microbial taxa, as well as changes in the microenvironment (i.e., nutrient stoichiometry and root exudates). Moreover, bacterial and fungal community composition in rhizosphere and bulk soil were governed by distinct driving factors. TP and NH(4)(+)–N are the two most important factors regulating bacterial and fungal community structure in rhizosphere soil, while pH and NO(3)(–)–N, DON, and TN were driving factors for bacterial and fungal community structure in bulk soil, respectively. Collectively, our results demonstrated that the changes in microbial diversity and composition were more obvious along stand age gradients than between sampling locations (rhizosphere vs. bulk soil) in Chinese fir plantations.
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spelling pubmed-89049682022-03-10 Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China Wang, Yuzhe Jiao, Pengyu Guo, Wen Du, Dajun Hu, Yalin Tan, Xiang Liu, Xian Front Microbiol Microbiology Soil microorganisms play key roles in biogeochemical cycling in forest ecosystems. However, whether the responses of microbial community with stand development differed in rhizosphere and bulk soils remains unknown. We collected rhizosphere and bulk soil in Chinese fir plantations with different stand ages (7a, 15a, 24a, and 34a) in subtropical China, and determined bacterial and fungal community variation via high-throughput sequencing. The results showed that soil bacterial, but not fungal, community diversity significantly differed among stand ages and between rhizosphere and bulk soils (p < 0.05). The differences in Shannon–Wiener and Simpson’s indices between rhizosphere and bulk soil varied with stand age, with significant higher soil bacterial diversity in rhizosphere than bulk soils in 7a and 34a plantations (p < 0.05), but there were no significant difference in soil bacterial diversity between rhizosphere and bulk soils in 15a and 24a plantations (p > 0.05). Soil microbial community composition varied significantly with stand age but not between the rhizosphere and bulk soil. The dominant bacterial phyla at all ages were Acidobacteria and Proteobacteria, while the dominant fungal phyla were Ascomycota and Basidiomycota in both rhizosphere and bulk soil. They showed inconsistent distribution patterns along stand age gradient (7–34a) in the rhizosphere and bulk soil, suggesting distinct ecological strategy (r-strategist vs. k-strategist) of different microbial taxa, as well as changes in the microenvironment (i.e., nutrient stoichiometry and root exudates). Moreover, bacterial and fungal community composition in rhizosphere and bulk soil were governed by distinct driving factors. TP and NH(4)(+)–N are the two most important factors regulating bacterial and fungal community structure in rhizosphere soil, while pH and NO(3)(–)–N, DON, and TN were driving factors for bacterial and fungal community structure in bulk soil, respectively. Collectively, our results demonstrated that the changes in microbial diversity and composition were more obvious along stand age gradients than between sampling locations (rhizosphere vs. bulk soil) in Chinese fir plantations. Frontiers Media S.A. 2022-02-23 /pmc/articles/PMC8904968/ /pubmed/35281312 http://dx.doi.org/10.3389/fmicb.2021.777862 Text en Copyright © 2022 Wang, Jiao, Guo, Du, Hu, Tan and Liu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Wang, Yuzhe
Jiao, Pengyu
Guo, Wen
Du, Dajun
Hu, Yalin
Tan, Xiang
Liu, Xian
Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title_full Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title_fullStr Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title_full_unstemmed Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title_short Changes in Bulk and Rhizosphere Soil Microbial Diversity and Composition Along an Age Gradient of Chinese Fir (Cunninghamia lanceolate) Plantations in Subtropical China
title_sort changes in bulk and rhizosphere soil microbial diversity and composition along an age gradient of chinese fir (cunninghamia lanceolate) plantations in subtropical china
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8904968/
https://www.ncbi.nlm.nih.gov/pubmed/35281312
http://dx.doi.org/10.3389/fmicb.2021.777862
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