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A novel approach to the functional classification of retinal ganglion cells
Retinal neurons are remarkedly diverse based on structure, function and genetic identity. Classifying these cells is a challenging task, requiring multimodal methodology. Here, we introduce a novel approach for retinal ganglion cell (RGC) classification, based on pharmacogenetics combined with immun...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8905177/ https://www.ncbi.nlm.nih.gov/pubmed/35259949 http://dx.doi.org/10.1098/rsob.210367 |
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author | Hilgen, Gerrit Kartsaki, Evgenia Kartysh, Viktoriia Cessac, Bruno Sernagor, Evelyne |
author_facet | Hilgen, Gerrit Kartsaki, Evgenia Kartysh, Viktoriia Cessac, Bruno Sernagor, Evelyne |
author_sort | Hilgen, Gerrit |
collection | PubMed |
description | Retinal neurons are remarkedly diverse based on structure, function and genetic identity. Classifying these cells is a challenging task, requiring multimodal methodology. Here, we introduce a novel approach for retinal ganglion cell (RGC) classification, based on pharmacogenetics combined with immunohistochemistry and large-scale retinal electrophysiology. Our novel strategy allows grouping of cells sharing gene expression and understanding how these cell classes respond to basic and complex visual scenes. Our approach consists of several consecutive steps. First, the spike firing frequency is increased in RGCs co-expressing a certain gene (Scnn1a or Grik4) using excitatory DREADDs (designer receptors exclusively activated by designer drugs) in order to single out activity originating specifically from these cells. Their spike location is then combined with post hoc immunostaining, to unequivocally characterize their anatomical and functional features. We grouped these isolated RGCs into multiple clusters based on spike train similarities. Using this novel approach, we were able to extend the pre-existing list of Grik4-expressing RGC types to a total of eight and, for the first time, we provide a phenotypical description of 13 Scnn1a-expressing RGCs. The insights and methods gained here can guide not only RGC classification but neuronal classification challenges in other brain regions as well. |
format | Online Article Text |
id | pubmed-8905177 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Royal Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-89051772022-03-09 A novel approach to the functional classification of retinal ganglion cells Hilgen, Gerrit Kartsaki, Evgenia Kartysh, Viktoriia Cessac, Bruno Sernagor, Evelyne Open Biol Methods and Techniques Retinal neurons are remarkedly diverse based on structure, function and genetic identity. Classifying these cells is a challenging task, requiring multimodal methodology. Here, we introduce a novel approach for retinal ganglion cell (RGC) classification, based on pharmacogenetics combined with immunohistochemistry and large-scale retinal electrophysiology. Our novel strategy allows grouping of cells sharing gene expression and understanding how these cell classes respond to basic and complex visual scenes. Our approach consists of several consecutive steps. First, the spike firing frequency is increased in RGCs co-expressing a certain gene (Scnn1a or Grik4) using excitatory DREADDs (designer receptors exclusively activated by designer drugs) in order to single out activity originating specifically from these cells. Their spike location is then combined with post hoc immunostaining, to unequivocally characterize their anatomical and functional features. We grouped these isolated RGCs into multiple clusters based on spike train similarities. Using this novel approach, we were able to extend the pre-existing list of Grik4-expressing RGC types to a total of eight and, for the first time, we provide a phenotypical description of 13 Scnn1a-expressing RGCs. The insights and methods gained here can guide not only RGC classification but neuronal classification challenges in other brain regions as well. The Royal Society 2022-03-09 /pmc/articles/PMC8905177/ /pubmed/35259949 http://dx.doi.org/10.1098/rsob.210367 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited. |
spellingShingle | Methods and Techniques Hilgen, Gerrit Kartsaki, Evgenia Kartysh, Viktoriia Cessac, Bruno Sernagor, Evelyne A novel approach to the functional classification of retinal ganglion cells |
title | A novel approach to the functional classification of retinal ganglion cells |
title_full | A novel approach to the functional classification of retinal ganglion cells |
title_fullStr | A novel approach to the functional classification of retinal ganglion cells |
title_full_unstemmed | A novel approach to the functional classification of retinal ganglion cells |
title_short | A novel approach to the functional classification of retinal ganglion cells |
title_sort | novel approach to the functional classification of retinal ganglion cells |
topic | Methods and Techniques |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8905177/ https://www.ncbi.nlm.nih.gov/pubmed/35259949 http://dx.doi.org/10.1098/rsob.210367 |
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