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MODIT: MOtif DIscovery in Temporal Networks

Temporal networks are graphs where each edge is linked with a timestamp, denoting when an interaction between two nodes happens. According to the most recently proposed definitions of the problem, motif search in temporal networks consists in finding and counting all connected temporal graphs Q (cal...

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Autores principales: Grasso, Roberto, Micale, Giovanni, Ferro, Alfredo, Pulvirenti, Alfredo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8905430/
https://www.ncbi.nlm.nih.gov/pubmed/35281988
http://dx.doi.org/10.3389/fdata.2021.806014
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author Grasso, Roberto
Micale, Giovanni
Ferro, Alfredo
Pulvirenti, Alfredo
author_facet Grasso, Roberto
Micale, Giovanni
Ferro, Alfredo
Pulvirenti, Alfredo
author_sort Grasso, Roberto
collection PubMed
description Temporal networks are graphs where each edge is linked with a timestamp, denoting when an interaction between two nodes happens. According to the most recently proposed definitions of the problem, motif search in temporal networks consists in finding and counting all connected temporal graphs Q (called motifs) occurring in a larger temporal network T, such that matched target edges follow the same chronological order imposed by edges in Q. In the last few years, several algorithms have been proposed to solve motif search, but most of them are limited to very small or specific motifs due to the computational complexity of the problem. In this paper, we present MODIT (MOtif DIscovery in Temporal Networks), an algorithm for counting motifs of any size in temporal networks, inspired by a very recent algorithm for subgraph isomorphism in temporal networks, called TemporalRI. Experiments show that for big motifs (more than 3 nodes and 3 edges) MODIT can efficiently retrieve them in reasonable time (up to few hours) in many networks of medium and large size and outperforms state-of-the art algorithms.
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spelling pubmed-89054302022-03-10 MODIT: MOtif DIscovery in Temporal Networks Grasso, Roberto Micale, Giovanni Ferro, Alfredo Pulvirenti, Alfredo Front Big Data Big Data Temporal networks are graphs where each edge is linked with a timestamp, denoting when an interaction between two nodes happens. According to the most recently proposed definitions of the problem, motif search in temporal networks consists in finding and counting all connected temporal graphs Q (called motifs) occurring in a larger temporal network T, such that matched target edges follow the same chronological order imposed by edges in Q. In the last few years, several algorithms have been proposed to solve motif search, but most of them are limited to very small or specific motifs due to the computational complexity of the problem. In this paper, we present MODIT (MOtif DIscovery in Temporal Networks), an algorithm for counting motifs of any size in temporal networks, inspired by a very recent algorithm for subgraph isomorphism in temporal networks, called TemporalRI. Experiments show that for big motifs (more than 3 nodes and 3 edges) MODIT can efficiently retrieve them in reasonable time (up to few hours) in many networks of medium and large size and outperforms state-of-the art algorithms. Frontiers Media S.A. 2022-02-23 /pmc/articles/PMC8905430/ /pubmed/35281988 http://dx.doi.org/10.3389/fdata.2021.806014 Text en Copyright © 2022 Grasso, Micale, Ferro and Pulvirenti. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Big Data
Grasso, Roberto
Micale, Giovanni
Ferro, Alfredo
Pulvirenti, Alfredo
MODIT: MOtif DIscovery in Temporal Networks
title MODIT: MOtif DIscovery in Temporal Networks
title_full MODIT: MOtif DIscovery in Temporal Networks
title_fullStr MODIT: MOtif DIscovery in Temporal Networks
title_full_unstemmed MODIT: MOtif DIscovery in Temporal Networks
title_short MODIT: MOtif DIscovery in Temporal Networks
title_sort modit: motif discovery in temporal networks
topic Big Data
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8905430/
https://www.ncbi.nlm.nih.gov/pubmed/35281988
http://dx.doi.org/10.3389/fdata.2021.806014
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