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Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR

BACKGROUND: The emergent crisis of the COVID-19 pandemic has posed enormous challenges for clinical laboratories to speed up diagnostics. The current reference standard for the diagnosis of COVID-19 is real time reverse transcriptase PCR on various platforms. However, even with automation, the turna...

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Autores principales: Srivastava, Smriti, Singh, Parul, Malhotra, Rajesh, Mathur, Purva
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8906026/
https://www.ncbi.nlm.nih.gov/pubmed/35278535
http://dx.doi.org/10.1016/j.jviromet.2022.114521
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author Srivastava, Smriti
Singh, Parul
Malhotra, Rajesh
Mathur, Purva
author_facet Srivastava, Smriti
Singh, Parul
Malhotra, Rajesh
Mathur, Purva
author_sort Srivastava, Smriti
collection PubMed
description BACKGROUND: The emergent crisis of the COVID-19 pandemic has posed enormous challenges for clinical laboratories to speed up diagnostics. The current reference standard for the diagnosis of COVID-19 is real time reverse transcriptase PCR on various platforms. However, even with automation, the turnaround time is huge enough to keep up with ever increasing numbers of patients. With increasing surge of COVID cases we need rapid diagnostic tests with good sensitivity and specificity. OBJECTIVES: Comparison between Abbott ID NOW COVID-19 and real time reverse transcriptase PCR as a reference method. MATERIALS AND METHODS: Specimens from seventy-two individuals were obtained over a period of two months which were processed for ID NOW and RTPCR at a dedicated COVID-19 centre of AIIMS. Dry nasal swabs were used for ID NOW while nasopharyngeal swabs along with throat swab were used for RTPCR. Among the participants, 15 were healthcare workers. Mild COVID was seen in 36 participants, moderate in 19 and severe in 9. Eight participants had non COVID illness. RESULTS: From the given samples, we observed that ID NOW has a sensitivity of 93.22% (55/59) specificity 100% (13/13), PPV 100% (55/55) and NPV 76.47% (13/17). CONCLUSION: ID NOW is a convenient, rapid molecular test which makes it suitable for both in laboratory use and as a point of care test. It can be a rapid rule-in test for COVID-19. Negative results, however, have to be interpreted as per the context.
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spelling pubmed-89060262022-03-09 Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR Srivastava, Smriti Singh, Parul Malhotra, Rajesh Mathur, Purva J Virol Methods Article BACKGROUND: The emergent crisis of the COVID-19 pandemic has posed enormous challenges for clinical laboratories to speed up diagnostics. The current reference standard for the diagnosis of COVID-19 is real time reverse transcriptase PCR on various platforms. However, even with automation, the turnaround time is huge enough to keep up with ever increasing numbers of patients. With increasing surge of COVID cases we need rapid diagnostic tests with good sensitivity and specificity. OBJECTIVES: Comparison between Abbott ID NOW COVID-19 and real time reverse transcriptase PCR as a reference method. MATERIALS AND METHODS: Specimens from seventy-two individuals were obtained over a period of two months which were processed for ID NOW and RTPCR at a dedicated COVID-19 centre of AIIMS. Dry nasal swabs were used for ID NOW while nasopharyngeal swabs along with throat swab were used for RTPCR. Among the participants, 15 were healthcare workers. Mild COVID was seen in 36 participants, moderate in 19 and severe in 9. Eight participants had non COVID illness. RESULTS: From the given samples, we observed that ID NOW has a sensitivity of 93.22% (55/59) specificity 100% (13/13), PPV 100% (55/55) and NPV 76.47% (13/17). CONCLUSION: ID NOW is a convenient, rapid molecular test which makes it suitable for both in laboratory use and as a point of care test. It can be a rapid rule-in test for COVID-19. Negative results, however, have to be interpreted as per the context. Elsevier B.V. 2022-06 2022-03-09 /pmc/articles/PMC8906026/ /pubmed/35278535 http://dx.doi.org/10.1016/j.jviromet.2022.114521 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Srivastava, Smriti
Singh, Parul
Malhotra, Rajesh
Mathur, Purva
Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title_full Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title_fullStr Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title_full_unstemmed Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title_short Comparison of Abbott ID NOW, a novel isothermal amplification based COVID-19 diagnostic method with RTPCR
title_sort comparison of abbott id now, a novel isothermal amplification based covid-19 diagnostic method with rtpcr
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8906026/
https://www.ncbi.nlm.nih.gov/pubmed/35278535
http://dx.doi.org/10.1016/j.jviromet.2022.114521
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