Cargando…
Relative free-energy calculations for scaffold hopping-type transformations with an automated RE-EDS sampling procedure
The calculation of relative free-energy differences between different compounds plays an important role in drug design to identify potent binders for a given protein target. Most rigorous methods based on molecular dynamics simulations estimate the free-energy difference between pairs of ligands. Th...
Autores principales: | Ries, Benjamin, Normak, Karl, Weiß, R. Gregor, Rieder, Salomé, Barros, Emília P., Champion, Candide, König, Gerhard, Riniker, Sereina |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8907147/ https://www.ncbi.nlm.nih.gov/pubmed/34978000 http://dx.doi.org/10.1007/s10822-021-00436-z |
Ejemplares similares
-
Accounting for Solvation Correlation Effects on the
Thermodynamics of Water Networks in Protein Cavities
por: Barros, Emilia P., et al.
Publicado: (2023) -
Replica-Exchange Enveloping Distribution Sampling
Using Generalized AMBER Force-Field Topologies: Application to Relative
Hydration Free-Energy Calculations for Large Sets of Molecules
por: Rieder, Salomé R., et al.
Publicado: (2022) -
Accelerating Alchemical
Free Energy Prediction Using
a Multistate Method: Application to Multiple Kinases
por: Champion, Candide, et al.
Publicado: (2023) -
RestraintMaker: a graph-based approach to select distance restraints in free-energy calculations with dual topology
por: Ries, Benjamin, et al.
Publicado: (2022) -
Development of an open-source software for isomer enumeration
por: Rieder, Salomé R., et al.
Publicado: (2023)