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Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications
The genus Eristalinus is widely distributed globally. Four complete mitochondrial genomes (i.e., mitogenomes) of Eristalinus were sequenced and analyzed in this study: Eristalinus viridis (Coquillett, 1898), E. quinquestriatus (Fabricius, 1781), E. tarsalis (Macquart, 1855), and E. sp. Within these...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8907203/ https://www.ncbi.nlm.nih.gov/pubmed/35264733 http://dx.doi.org/10.1038/s41598-022-08172-6 |
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author | Li, Hu Li, Juan |
author_facet | Li, Hu Li, Juan |
author_sort | Li, Hu |
collection | PubMed |
description | The genus Eristalinus is widely distributed globally. Four complete mitochondrial genomes (i.e., mitogenomes) of Eristalinus were sequenced and analyzed in this study: Eristalinus viridis (Coquillett, 1898), E. quinquestriatus (Fabricius, 1781), E. tarsalis (Macquart, 1855), and E. sp. Within these four sequenced mitogenomes, most protein-coding genes (ND2, CO1, COX2, COX3, ND3, ND5, ND4, ND4L, ND6, and Cytb) began with a typical ATN (T/C/G/A) start codon and ended with a stop codon TAA or incomplete T, whereas ND1 began with the start codon TTG. ND3 ended with TAG. The secondary tRNA structure was that of a typical cloverleaf, and only the tRNA-Ser1 lacked a DHU arm. Three and five domains appeared in the 12S and 16S rRNA secondary structures, respectively. The phylogenetic relationships among the four Eristalinus species combined with the published mitogenomes of Syrphidae were reconstructed using the maximum likelihood and Bayesian inference methods, which support the monophyly of the subfamily Syrphinae but do not support that of the subfamily Eristalinae. Of note, Eristalini and Syrphini are monophyletic groups. The mitogenomes of E. viridis, E. quinquestriatus, E. sp., and E. tarsalis are useful for determining the phylogenetic relationships and evolution of Syrphidae. |
format | Online Article Text |
id | pubmed-8907203 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89072032022-03-10 Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications Li, Hu Li, Juan Sci Rep Article The genus Eristalinus is widely distributed globally. Four complete mitochondrial genomes (i.e., mitogenomes) of Eristalinus were sequenced and analyzed in this study: Eristalinus viridis (Coquillett, 1898), E. quinquestriatus (Fabricius, 1781), E. tarsalis (Macquart, 1855), and E. sp. Within these four sequenced mitogenomes, most protein-coding genes (ND2, CO1, COX2, COX3, ND3, ND5, ND4, ND4L, ND6, and Cytb) began with a typical ATN (T/C/G/A) start codon and ended with a stop codon TAA or incomplete T, whereas ND1 began with the start codon TTG. ND3 ended with TAG. The secondary tRNA structure was that of a typical cloverleaf, and only the tRNA-Ser1 lacked a DHU arm. Three and five domains appeared in the 12S and 16S rRNA secondary structures, respectively. The phylogenetic relationships among the four Eristalinus species combined with the published mitogenomes of Syrphidae were reconstructed using the maximum likelihood and Bayesian inference methods, which support the monophyly of the subfamily Syrphinae but do not support that of the subfamily Eristalinae. Of note, Eristalini and Syrphini are monophyletic groups. The mitogenomes of E. viridis, E. quinquestriatus, E. sp., and E. tarsalis are useful for determining the phylogenetic relationships and evolution of Syrphidae. Nature Publishing Group UK 2022-03-09 /pmc/articles/PMC8907203/ /pubmed/35264733 http://dx.doi.org/10.1038/s41598-022-08172-6 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Li, Hu Li, Juan Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title | Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title_full | Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title_fullStr | Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title_full_unstemmed | Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title_short | Comparative analysis of four complete mitogenomes from hoverfly genus Eristalinus with phylogenetic implications |
title_sort | comparative analysis of four complete mitogenomes from hoverfly genus eristalinus with phylogenetic implications |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8907203/ https://www.ncbi.nlm.nih.gov/pubmed/35264733 http://dx.doi.org/10.1038/s41598-022-08172-6 |
work_keys_str_mv | AT lihu comparativeanalysisoffourcompletemitogenomesfromhoverflygenuseristalinuswithphylogeneticimplications AT lijuan comparativeanalysisoffourcompletemitogenomesfromhoverflygenuseristalinuswithphylogeneticimplications |