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Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection

Kunitz trypsin inhibitor (KTI), a harmful protein, seriously affects food hygiene and safety. Therefore, a sensitive, efficient, and rapid method for KTI detection is urgently needed. Aptamers are short and single‐stranded (ss) DNA that recognize target molecules with high affinity. This work used g...

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Autores principales: Bao, Yunxiang, Zhu, Dengzhao, Zhao, Yang, Li, Xinzhu, Gu, Chunmei, Yu, Hansong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8907715/
https://www.ncbi.nlm.nih.gov/pubmed/35282009
http://dx.doi.org/10.1002/fsn3.2729
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author Bao, Yunxiang
Zhu, Dengzhao
Zhao, Yang
Li, Xinzhu
Gu, Chunmei
Yu, Hansong
author_facet Bao, Yunxiang
Zhu, Dengzhao
Zhao, Yang
Li, Xinzhu
Gu, Chunmei
Yu, Hansong
author_sort Bao, Yunxiang
collection PubMed
description Kunitz trypsin inhibitor (KTI), a harmful protein, seriously affects food hygiene and safety. Therefore, a sensitive, efficient, and rapid method for KTI detection is urgently needed. Aptamers are short and single‐stranded (ss) DNA that recognize target molecules with high affinity. This work used graphene oxide‐SELEX (GO‐SELEX) to screen KTI aptamers. The positive and reverse screening was designed to ensure the high specificity and affinity of the selected aptamers. After 10 rounds of screening, multiple nucleic acid chains were obtained, and the chains were sequenced. Three aptamers with better affinity were obtained, and the values of the dissociation constant (K (d)) were calculated to be 52.6 nM, 22.7 nM, and 67.9 nM, respectively. Finally, a colorimetric aptamer biosensor based on gold nanoparticles (AuNPs) was constructed. The biosensor exhibited a broader linear range of 30–750 ng/ml, with a lower detection limit of 18 ng/ml, and the spiked recovery rate was between 98.2% and 103.3%. This experiment preliminary demonstrated the potential of the application of KTI aptamer in the real sample tests.
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spelling pubmed-89077152022-03-10 Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection Bao, Yunxiang Zhu, Dengzhao Zhao, Yang Li, Xinzhu Gu, Chunmei Yu, Hansong Food Sci Nutr Original Articles Kunitz trypsin inhibitor (KTI), a harmful protein, seriously affects food hygiene and safety. Therefore, a sensitive, efficient, and rapid method for KTI detection is urgently needed. Aptamers are short and single‐stranded (ss) DNA that recognize target molecules with high affinity. This work used graphene oxide‐SELEX (GO‐SELEX) to screen KTI aptamers. The positive and reverse screening was designed to ensure the high specificity and affinity of the selected aptamers. After 10 rounds of screening, multiple nucleic acid chains were obtained, and the chains were sequenced. Three aptamers with better affinity were obtained, and the values of the dissociation constant (K (d)) were calculated to be 52.6 nM, 22.7 nM, and 67.9 nM, respectively. Finally, a colorimetric aptamer biosensor based on gold nanoparticles (AuNPs) was constructed. The biosensor exhibited a broader linear range of 30–750 ng/ml, with a lower detection limit of 18 ng/ml, and the spiked recovery rate was between 98.2% and 103.3%. This experiment preliminary demonstrated the potential of the application of KTI aptamer in the real sample tests. John Wiley and Sons Inc. 2022-01-19 /pmc/articles/PMC8907715/ /pubmed/35282009 http://dx.doi.org/10.1002/fsn3.2729 Text en © 2022 The Authors. Food Science & Nutrition published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Bao, Yunxiang
Zhu, Dengzhao
Zhao, Yang
Li, Xinzhu
Gu, Chunmei
Yu, Hansong
Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title_full Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title_fullStr Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title_full_unstemmed Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title_short Selection and identification of high‐affinity aptamer of Kunitz trypsin inhibitor and their application in rapid and specific detection
title_sort selection and identification of high‐affinity aptamer of kunitz trypsin inhibitor and their application in rapid and specific detection
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8907715/
https://www.ncbi.nlm.nih.gov/pubmed/35282009
http://dx.doi.org/10.1002/fsn3.2729
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