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Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data

We developed a machine-learning-based model that could predict a decrease in one-year graft function after kidney transplantation, and investigated the risk factors of the decreased function. A total of 4317 cases were included from the Korean Organ Transplant Registry (2014–2019). An XGBoost model...

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Autores principales: Hong, Moongi Simon, Lee, Yu-Ho, Kong, Jin-Min, Kwon, Oh-Jung, Jung, Cheol-Woong, Yang, Jaeseok, Kim, Myoung-Soo, Han, Hyun-Wook, Nam, Sang-Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8911006/
https://www.ncbi.nlm.nih.gov/pubmed/35268350
http://dx.doi.org/10.3390/jcm11051259
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author Hong, Moongi Simon
Lee, Yu-Ho
Kong, Jin-Min
Kwon, Oh-Jung
Jung, Cheol-Woong
Yang, Jaeseok
Kim, Myoung-Soo
Han, Hyun-Wook
Nam, Sang-Min
author_facet Hong, Moongi Simon
Lee, Yu-Ho
Kong, Jin-Min
Kwon, Oh-Jung
Jung, Cheol-Woong
Yang, Jaeseok
Kim, Myoung-Soo
Han, Hyun-Wook
Nam, Sang-Min
author_sort Hong, Moongi Simon
collection PubMed
description We developed a machine-learning-based model that could predict a decrease in one-year graft function after kidney transplantation, and investigated the risk factors of the decreased function. A total of 4317 cases were included from the Korean Organ Transplant Registry (2014–2019). An XGBoost model was trained to predict the recipient’s one-year estimated glomerular filtration rate (eGFR) below 45 mL/min/1.73 m(2) using 112 pre- and peri-transplantation variables. The network of model factors was drawn using inter-factor partial correlations and the statistical significance of each factor. The model with seven features achieved an area under the curve of 0.82, sensitivity of 0.73, and specificity of 0.79. The model prediction was associated with five-year graft and rejection-free survival. Post-transplantation hospitalization >25 days and eGFR ≥ 88.0 were the prominent risk and preventive factors, respectively. Donor age and post-transplantation eGFR < 59.8 were connected to multiple risk factors on the network. Therefore, careful donor–recipient matching in older donors, and avoiding pre-transplantation risk factors, would reduce the risk of graft dysfunction. The model might improve long-term graft outcomes by supporting early detection of graft dysfunction, and proactive risk factor control.
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spelling pubmed-89110062022-03-11 Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data Hong, Moongi Simon Lee, Yu-Ho Kong, Jin-Min Kwon, Oh-Jung Jung, Cheol-Woong Yang, Jaeseok Kim, Myoung-Soo Han, Hyun-Wook Nam, Sang-Min J Clin Med Article We developed a machine-learning-based model that could predict a decrease in one-year graft function after kidney transplantation, and investigated the risk factors of the decreased function. A total of 4317 cases were included from the Korean Organ Transplant Registry (2014–2019). An XGBoost model was trained to predict the recipient’s one-year estimated glomerular filtration rate (eGFR) below 45 mL/min/1.73 m(2) using 112 pre- and peri-transplantation variables. The network of model factors was drawn using inter-factor partial correlations and the statistical significance of each factor. The model with seven features achieved an area under the curve of 0.82, sensitivity of 0.73, and specificity of 0.79. The model prediction was associated with five-year graft and rejection-free survival. Post-transplantation hospitalization >25 days and eGFR ≥ 88.0 were the prominent risk and preventive factors, respectively. Donor age and post-transplantation eGFR < 59.8 were connected to multiple risk factors on the network. Therefore, careful donor–recipient matching in older donors, and avoiding pre-transplantation risk factors, would reduce the risk of graft dysfunction. The model might improve long-term graft outcomes by supporting early detection of graft dysfunction, and proactive risk factor control. MDPI 2022-02-25 /pmc/articles/PMC8911006/ /pubmed/35268350 http://dx.doi.org/10.3390/jcm11051259 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Hong, Moongi Simon
Lee, Yu-Ho
Kong, Jin-Min
Kwon, Oh-Jung
Jung, Cheol-Woong
Yang, Jaeseok
Kim, Myoung-Soo
Han, Hyun-Wook
Nam, Sang-Min
Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title_full Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title_fullStr Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title_full_unstemmed Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title_short Personalized Prediction of Kidney Function Decline and Network Analysis of the Risk Factors after Kidney Transplantation Using Nationwide Cohort Data
title_sort personalized prediction of kidney function decline and network analysis of the risk factors after kidney transplantation using nationwide cohort data
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8911006/
https://www.ncbi.nlm.nih.gov/pubmed/35268350
http://dx.doi.org/10.3390/jcm11051259
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