Cargando…
Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation
The diagnosis and management of inflammatory bowel disease relies on histological assessment, which is costly, subjective, and lacks utility for point-of-care diagnosis. Fourier-transform infra-red spectroscopy provides rapid, non-destructive, reproducible, and automatable label-free biochemical ima...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8911059/ https://www.ncbi.nlm.nih.gov/pubmed/35269993 http://dx.doi.org/10.3390/ijms23052849 |
_version_ | 1784666683292516352 |
---|---|
author | Keung, Charlotte Heraud, Philip Kuk, Nathan Lim, Rebecca Sievert, William Moore, Gregory Wood, Bayden |
author_facet | Keung, Charlotte Heraud, Philip Kuk, Nathan Lim, Rebecca Sievert, William Moore, Gregory Wood, Bayden |
author_sort | Keung, Charlotte |
collection | PubMed |
description | The diagnosis and management of inflammatory bowel disease relies on histological assessment, which is costly, subjective, and lacks utility for point-of-care diagnosis. Fourier-transform infra-red spectroscopy provides rapid, non-destructive, reproducible, and automatable label-free biochemical imaging of tissue for diagnostic purposes. This study characterises colitis using spectroscopy, discriminates colitis from healthy tissue, and classifies inflammation severity. Hyperspectral images were obtained from fixed intestinal sections of a murine colitis model treated with cell therapy to improve inflammation. Multivariate analyses and classification modelling were performed using supervised and unsupervised machine-learning algorithms. Quantitative analysis of severe colitis showed increased protein, collagen, and nucleic acids, but reduced glycogen when compared with normal tissue. A partial least squares discriminant analysis model, including spectra from all intestinal layers, classified normal colon and severe colitis with a sensitivity of 91.4% and a specificity of 93.3%. Colitis severity was classified by a stacked ensemble model yielding an average area under the receiver operating characteristic curve of 0.95, 0.88, 0.79, and 0.85 for controls, mild, moderate, and severe colitis, respectively. Infra-red spectroscopy can detect unique biochemical features of intestinal inflammation and accurately classify normal and inflamed tissue and quantify the severity of inflammation. This is a promising alternative to histological assessment. |
format | Online Article Text |
id | pubmed-8911059 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-89110592022-03-11 Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation Keung, Charlotte Heraud, Philip Kuk, Nathan Lim, Rebecca Sievert, William Moore, Gregory Wood, Bayden Int J Mol Sci Article The diagnosis and management of inflammatory bowel disease relies on histological assessment, which is costly, subjective, and lacks utility for point-of-care diagnosis. Fourier-transform infra-red spectroscopy provides rapid, non-destructive, reproducible, and automatable label-free biochemical imaging of tissue for diagnostic purposes. This study characterises colitis using spectroscopy, discriminates colitis from healthy tissue, and classifies inflammation severity. Hyperspectral images were obtained from fixed intestinal sections of a murine colitis model treated with cell therapy to improve inflammation. Multivariate analyses and classification modelling were performed using supervised and unsupervised machine-learning algorithms. Quantitative analysis of severe colitis showed increased protein, collagen, and nucleic acids, but reduced glycogen when compared with normal tissue. A partial least squares discriminant analysis model, including spectra from all intestinal layers, classified normal colon and severe colitis with a sensitivity of 91.4% and a specificity of 93.3%. Colitis severity was classified by a stacked ensemble model yielding an average area under the receiver operating characteristic curve of 0.95, 0.88, 0.79, and 0.85 for controls, mild, moderate, and severe colitis, respectively. Infra-red spectroscopy can detect unique biochemical features of intestinal inflammation and accurately classify normal and inflamed tissue and quantify the severity of inflammation. This is a promising alternative to histological assessment. MDPI 2022-03-05 /pmc/articles/PMC8911059/ /pubmed/35269993 http://dx.doi.org/10.3390/ijms23052849 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Keung, Charlotte Heraud, Philip Kuk, Nathan Lim, Rebecca Sievert, William Moore, Gregory Wood, Bayden Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title | Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title_full | Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title_fullStr | Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title_full_unstemmed | Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title_short | Fourier-Transform Infra-Red Microspectroscopy Can Accurately Diagnose Colitis and Assess Severity of Inflammation |
title_sort | fourier-transform infra-red microspectroscopy can accurately diagnose colitis and assess severity of inflammation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8911059/ https://www.ncbi.nlm.nih.gov/pubmed/35269993 http://dx.doi.org/10.3390/ijms23052849 |
work_keys_str_mv | AT keungcharlotte fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT heraudphilip fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT kuknathan fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT limrebecca fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT sievertwilliam fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT mooregregory fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation AT woodbayden fouriertransforminfraredmicrospectroscopycanaccuratelydiagnosecolitisandassessseverityofinflammation |