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Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling

Lack of high-throughput phenotyping is a bottleneck to breeding for abiotic stress tolerance in crop plants. Efficient and non-destructive hyperspectral imaging can quantify plant physiological traits under abiotic stresses; however, prediction models generally are developed for few genotypes of one...

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Autores principales: Lin, Meng-Yang, Lynch, Valerie, Ma, Dongdong, Maki, Hideki, Jin, Jian, Tuinstra, Mitchell
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8912614/
https://www.ncbi.nlm.nih.gov/pubmed/35270145
http://dx.doi.org/10.3390/plants11050676
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author Lin, Meng-Yang
Lynch, Valerie
Ma, Dongdong
Maki, Hideki
Jin, Jian
Tuinstra, Mitchell
author_facet Lin, Meng-Yang
Lynch, Valerie
Ma, Dongdong
Maki, Hideki
Jin, Jian
Tuinstra, Mitchell
author_sort Lin, Meng-Yang
collection PubMed
description Lack of high-throughput phenotyping is a bottleneck to breeding for abiotic stress tolerance in crop plants. Efficient and non-destructive hyperspectral imaging can quantify plant physiological traits under abiotic stresses; however, prediction models generally are developed for few genotypes of one species, limiting the broader applications of this technology. Therefore, the objective of this research was to explore the possibility of developing cross-species models to predict physiological traits (relative water content and nitrogen content) based on hyperspectral reflectance through partial least square regression for three genotypes of sorghum (Sorghum bicolor (L.) Moench) and six genotypes of corn (Zea mays L.) under varying water and nitrogen treatments. Multi-species models were predictive for the relative water content of sorghum and corn (R(2) = 0.809), as well as for the nitrogen content of sorghum and corn (R(2) = 0.637). Reflectances at 506, 535, 583, 627, 652, 694, 722, and 964 nm were responsive to changes in the relative water content, while the reflectances at 486, 521, 625, 680, 699, and 754 nm were responsive to changes in the nitrogen content. High-throughput hyperspectral imaging can be used to predict physiological status of plants across genotypes and some similar species with acceptable accuracy.
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spelling pubmed-89126142022-03-11 Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling Lin, Meng-Yang Lynch, Valerie Ma, Dongdong Maki, Hideki Jin, Jian Tuinstra, Mitchell Plants (Basel) Article Lack of high-throughput phenotyping is a bottleneck to breeding for abiotic stress tolerance in crop plants. Efficient and non-destructive hyperspectral imaging can quantify plant physiological traits under abiotic stresses; however, prediction models generally are developed for few genotypes of one species, limiting the broader applications of this technology. Therefore, the objective of this research was to explore the possibility of developing cross-species models to predict physiological traits (relative water content and nitrogen content) based on hyperspectral reflectance through partial least square regression for three genotypes of sorghum (Sorghum bicolor (L.) Moench) and six genotypes of corn (Zea mays L.) under varying water and nitrogen treatments. Multi-species models were predictive for the relative water content of sorghum and corn (R(2) = 0.809), as well as for the nitrogen content of sorghum and corn (R(2) = 0.637). Reflectances at 506, 535, 583, 627, 652, 694, 722, and 964 nm were responsive to changes in the relative water content, while the reflectances at 486, 521, 625, 680, 699, and 754 nm were responsive to changes in the nitrogen content. High-throughput hyperspectral imaging can be used to predict physiological status of plants across genotypes and some similar species with acceptable accuracy. MDPI 2022-03-01 /pmc/articles/PMC8912614/ /pubmed/35270145 http://dx.doi.org/10.3390/plants11050676 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lin, Meng-Yang
Lynch, Valerie
Ma, Dongdong
Maki, Hideki
Jin, Jian
Tuinstra, Mitchell
Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title_full Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title_fullStr Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title_full_unstemmed Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title_short Multi-Species Prediction of Physiological Traits with Hyperspectral Modeling
title_sort multi-species prediction of physiological traits with hyperspectral modeling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8912614/
https://www.ncbi.nlm.nih.gov/pubmed/35270145
http://dx.doi.org/10.3390/plants11050676
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