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Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia

Because of COVID-19's effect on pulmonary tissues, Chest X-ray(CXR) and Computed Tomography (CT) images have become the preferred imaging modality for detecting COVID-19 infections at the early diagnosis stages, particularly when the symptoms are not specific. A significant fraction of individu...

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Detalles Bibliográficos
Autores principales: Showkat, Sadia, Qureshi, Shaima
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913041/
https://www.ncbi.nlm.nih.gov/pubmed/35291673
http://dx.doi.org/10.1016/j.chemolab.2022.104534
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author Showkat, Sadia
Qureshi, Shaima
author_facet Showkat, Sadia
Qureshi, Shaima
author_sort Showkat, Sadia
collection PubMed
description Because of COVID-19's effect on pulmonary tissues, Chest X-ray(CXR) and Computed Tomography (CT) images have become the preferred imaging modality for detecting COVID-19 infections at the early diagnosis stages, particularly when the symptoms are not specific. A significant fraction of individuals with COVID-19 have negative polymerase chain reaction (PCR) test results; therefore, imaging studies coupled with epidemiological, clinical, and laboratory data assist in the decision making. With the newer variants of COVID-19 emerging, the burden on diagnostic laboratories has increased manifold. Therefore, it is important to employ beyond laboratory measures to solve complex CXR image classification problems. One such tool is Convolutional Neural Network (CNN), one of the most dominant Deep Learning (DL) architectures. DL entails training a CNN for a task such as classification using extensive datasets. However, the labelled data for COVID-19 is scarce, proving to be a prime impediment to applying DL-assisted analysis. The available datasets are either scarce or too diversified to learn effective feature representations; therefore Transfer Learning (TL) approach is utilized. TL-based ResNet architecture has a powerful representational ability, making it popular in Computer Vision. The aim of this study is two-fold- firstly, to assess the performance of ResNet models for classifying Pneumonia cases from CXR images and secondly, to build a customized ResNet model and evaluate its contribution to the performance improvement. The global accuracies achieved by the five models i.e., ResNet18_v1, ResNet34_v1, ResNet50_v1, ResNet101_v1, ResNet152_v1 are 91.35%, 90.87%, 92.63%, 92.95%, and 92.95% respectively. ResNet50_v1 displayed the highest sensitivity of 97.18%, ResNet101_v1 showed the specificity of 94.02%, and ResNet18_v1 had the highest precision of 93.53%. The findings are encouraging, demonstrating the effectiveness of ResNet in the automatic detection of Pneumonia for COVID-19 diagnosis. The customized ResNet model presented in this study achieved 95% global accuracy, 95.65% precision, 92.74% specificity, and 95.9% sensitivity, thereby allowing a reliable analysis of CXR images to facilitate the clinical decision-making process. All simulations were carried in PyTorch utilizing Quadro 4000 GPU with Intel(R) Xeon(R) CPU E5-1650 v4 @ 3.60 ​GHz processor and 63.9 ​GB useable RAM.
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spelling pubmed-89130412022-03-11 Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia Showkat, Sadia Qureshi, Shaima Chemometr Intell Lab Syst Article Because of COVID-19's effect on pulmonary tissues, Chest X-ray(CXR) and Computed Tomography (CT) images have become the preferred imaging modality for detecting COVID-19 infections at the early diagnosis stages, particularly when the symptoms are not specific. A significant fraction of individuals with COVID-19 have negative polymerase chain reaction (PCR) test results; therefore, imaging studies coupled with epidemiological, clinical, and laboratory data assist in the decision making. With the newer variants of COVID-19 emerging, the burden on diagnostic laboratories has increased manifold. Therefore, it is important to employ beyond laboratory measures to solve complex CXR image classification problems. One such tool is Convolutional Neural Network (CNN), one of the most dominant Deep Learning (DL) architectures. DL entails training a CNN for a task such as classification using extensive datasets. However, the labelled data for COVID-19 is scarce, proving to be a prime impediment to applying DL-assisted analysis. The available datasets are either scarce or too diversified to learn effective feature representations; therefore Transfer Learning (TL) approach is utilized. TL-based ResNet architecture has a powerful representational ability, making it popular in Computer Vision. The aim of this study is two-fold- firstly, to assess the performance of ResNet models for classifying Pneumonia cases from CXR images and secondly, to build a customized ResNet model and evaluate its contribution to the performance improvement. The global accuracies achieved by the five models i.e., ResNet18_v1, ResNet34_v1, ResNet50_v1, ResNet101_v1, ResNet152_v1 are 91.35%, 90.87%, 92.63%, 92.95%, and 92.95% respectively. ResNet50_v1 displayed the highest sensitivity of 97.18%, ResNet101_v1 showed the specificity of 94.02%, and ResNet18_v1 had the highest precision of 93.53%. The findings are encouraging, demonstrating the effectiveness of ResNet in the automatic detection of Pneumonia for COVID-19 diagnosis. The customized ResNet model presented in this study achieved 95% global accuracy, 95.65% precision, 92.74% specificity, and 95.9% sensitivity, thereby allowing a reliable analysis of CXR images to facilitate the clinical decision-making process. All simulations were carried in PyTorch utilizing Quadro 4000 GPU with Intel(R) Xeon(R) CPU E5-1650 v4 @ 3.60 ​GHz processor and 63.9 ​GB useable RAM. Elsevier B.V. 2022-05-15 2022-03-11 /pmc/articles/PMC8913041/ /pubmed/35291673 http://dx.doi.org/10.1016/j.chemolab.2022.104534 Text en © 2022 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Showkat, Sadia
Qureshi, Shaima
Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title_full Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title_fullStr Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title_full_unstemmed Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title_short Efficacy of Transfer Learning-based ResNet models in Chest X-ray image classification for detecting COVID-19 Pneumonia
title_sort efficacy of transfer learning-based resnet models in chest x-ray image classification for detecting covid-19 pneumonia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913041/
https://www.ncbi.nlm.nih.gov/pubmed/35291673
http://dx.doi.org/10.1016/j.chemolab.2022.104534
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