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Mouse Genome Informatics (MGI): latest news from MGD and GXD

The Mouse Genome Informatics (MGI) database system combines multiple expertly curated community data resources into a shared knowledge management ecosystem united by common metadata annotation standards. MGI’s mission is to facilitate the use of the mouse as an experimental model for understanding t...

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Autores principales: Ringwald, Martin, Richardson, Joel E., Baldarelli, Richard M., Blake, Judith A., Kadin, James A., Smith, Cynthia, Bult, Carol J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913530/
https://www.ncbi.nlm.nih.gov/pubmed/34698891
http://dx.doi.org/10.1007/s00335-021-09921-0
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author Ringwald, Martin
Richardson, Joel E.
Baldarelli, Richard M.
Blake, Judith A.
Kadin, James A.
Smith, Cynthia
Bult, Carol J.
author_facet Ringwald, Martin
Richardson, Joel E.
Baldarelli, Richard M.
Blake, Judith A.
Kadin, James A.
Smith, Cynthia
Bult, Carol J.
author_sort Ringwald, Martin
collection PubMed
description The Mouse Genome Informatics (MGI) database system combines multiple expertly curated community data resources into a shared knowledge management ecosystem united by common metadata annotation standards. MGI’s mission is to facilitate the use of the mouse as an experimental model for understanding the genetic and genomic basis of human health and disease. MGI is the authoritative source for mouse gene, allele, and strain nomenclature and is the primary source of mouse phenotype annotations, functional annotations, developmental gene expression information, and annotations of mouse models with human diseases. MGI maintains mouse anatomy and phenotype ontologies and contributes to the development of the Gene Ontology and Disease Ontology and uses these ontologies as standard terminologies for annotation. The Mouse Genome Database (MGD) and the Gene Expression Database (GXD) are MGI’s two major knowledgebases. Here, we highlight some of the recent changes and enhancements to MGD and GXD that have been implemented in response to changing needs of the biomedical research community and to improve the efficiency of expert curation. MGI can be accessed freely at http://www.informatics.jax.org.
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spelling pubmed-89135302022-03-15 Mouse Genome Informatics (MGI): latest news from MGD and GXD Ringwald, Martin Richardson, Joel E. Baldarelli, Richard M. Blake, Judith A. Kadin, James A. Smith, Cynthia Bult, Carol J. Mamm Genome Article The Mouse Genome Informatics (MGI) database system combines multiple expertly curated community data resources into a shared knowledge management ecosystem united by common metadata annotation standards. MGI’s mission is to facilitate the use of the mouse as an experimental model for understanding the genetic and genomic basis of human health and disease. MGI is the authoritative source for mouse gene, allele, and strain nomenclature and is the primary source of mouse phenotype annotations, functional annotations, developmental gene expression information, and annotations of mouse models with human diseases. MGI maintains mouse anatomy and phenotype ontologies and contributes to the development of the Gene Ontology and Disease Ontology and uses these ontologies as standard terminologies for annotation. The Mouse Genome Database (MGD) and the Gene Expression Database (GXD) are MGI’s two major knowledgebases. Here, we highlight some of the recent changes and enhancements to MGD and GXD that have been implemented in response to changing needs of the biomedical research community and to improve the efficiency of expert curation. MGI can be accessed freely at http://www.informatics.jax.org. Springer US 2021-10-26 2022 /pmc/articles/PMC8913530/ /pubmed/34698891 http://dx.doi.org/10.1007/s00335-021-09921-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Ringwald, Martin
Richardson, Joel E.
Baldarelli, Richard M.
Blake, Judith A.
Kadin, James A.
Smith, Cynthia
Bult, Carol J.
Mouse Genome Informatics (MGI): latest news from MGD and GXD
title Mouse Genome Informatics (MGI): latest news from MGD and GXD
title_full Mouse Genome Informatics (MGI): latest news from MGD and GXD
title_fullStr Mouse Genome Informatics (MGI): latest news from MGD and GXD
title_full_unstemmed Mouse Genome Informatics (MGI): latest news from MGD and GXD
title_short Mouse Genome Informatics (MGI): latest news from MGD and GXD
title_sort mouse genome informatics (mgi): latest news from mgd and gxd
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913530/
https://www.ncbi.nlm.nih.gov/pubmed/34698891
http://dx.doi.org/10.1007/s00335-021-09921-0
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