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A comprehensive study of epitopes and immune reactivity among Plasmodium species
BACKGROUND: Malaria is a life-threatening disease caused by protozoan parasite of genus Plasmodium. Various antigenic proteins of Plasmodium are considered as the major targets for the development of an effective vaccine. The aim of the current study was a comprehensive analysis of the experimentall...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913861/ https://www.ncbi.nlm.nih.gov/pubmed/35277125 http://dx.doi.org/10.1186/s12866-022-02480-7 |
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author | Kalkal, Meenu Kalkal, Amit Dhanda, Sandeep Kumar Das, Emily Pande, Veena Das, Jyoti |
author_facet | Kalkal, Meenu Kalkal, Amit Dhanda, Sandeep Kumar Das, Emily Pande, Veena Das, Jyoti |
author_sort | Kalkal, Meenu |
collection | PubMed |
description | BACKGROUND: Malaria is a life-threatening disease caused by protozoan parasite of genus Plasmodium. Various antigenic proteins of Plasmodium are considered as the major targets for the development of an effective vaccine. The aim of the current study was a comprehensive analysis of the experimentally validated epitopes of Plasmodium obtained from various immunoassays. METHODS: Plasmodium species epitopes were prefetched from Immune Epitope Database (IEDB). Species specific classification of available epitopes was done for both human and murine malaria parasites. Further, these T cell and B cell epitopes along with MHC I/II binders of different Plasmodium species were examined to find out their capability to induce IFN-γ and IL-10 using IFNepitope and IL-10 Pred, respectively. RESULTS: The species-specific classification of 6874 unique epitopes resulted in the selection of predominant human and murine Plasmodium species. Further, the attempt was made to analyse the immune reactivity of these epitopes for their ability to induce cytokines namely IFN-γ and IL-10. Total, 2775 epitopes were predicted to possess IFN-γ inducing ability, whereas 1275 epitopes were found to be involved in the induction of IL-10. CONCLUSIONS: This study facilitates the assessment of Plasmodium epitopes and associated proteins as a potential approach to design and develop an epitope-based vaccine. Moreover, the results highlight the epitope-based immunization in malaria to induce a protective immune response. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-022-02480-7. |
format | Online Article Text |
id | pubmed-8913861 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-89138612022-03-11 A comprehensive study of epitopes and immune reactivity among Plasmodium species Kalkal, Meenu Kalkal, Amit Dhanda, Sandeep Kumar Das, Emily Pande, Veena Das, Jyoti BMC Microbiol Research BACKGROUND: Malaria is a life-threatening disease caused by protozoan parasite of genus Plasmodium. Various antigenic proteins of Plasmodium are considered as the major targets for the development of an effective vaccine. The aim of the current study was a comprehensive analysis of the experimentally validated epitopes of Plasmodium obtained from various immunoassays. METHODS: Plasmodium species epitopes were prefetched from Immune Epitope Database (IEDB). Species specific classification of available epitopes was done for both human and murine malaria parasites. Further, these T cell and B cell epitopes along with MHC I/II binders of different Plasmodium species were examined to find out their capability to induce IFN-γ and IL-10 using IFNepitope and IL-10 Pred, respectively. RESULTS: The species-specific classification of 6874 unique epitopes resulted in the selection of predominant human and murine Plasmodium species. Further, the attempt was made to analyse the immune reactivity of these epitopes for their ability to induce cytokines namely IFN-γ and IL-10. Total, 2775 epitopes were predicted to possess IFN-γ inducing ability, whereas 1275 epitopes were found to be involved in the induction of IL-10. CONCLUSIONS: This study facilitates the assessment of Plasmodium epitopes and associated proteins as a potential approach to design and develop an epitope-based vaccine. Moreover, the results highlight the epitope-based immunization in malaria to induce a protective immune response. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12866-022-02480-7. BioMed Central 2022-03-11 /pmc/articles/PMC8913861/ /pubmed/35277125 http://dx.doi.org/10.1186/s12866-022-02480-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Kalkal, Meenu Kalkal, Amit Dhanda, Sandeep Kumar Das, Emily Pande, Veena Das, Jyoti A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title | A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title_full | A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title_fullStr | A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title_full_unstemmed | A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title_short | A comprehensive study of epitopes and immune reactivity among Plasmodium species |
title_sort | comprehensive study of epitopes and immune reactivity among plasmodium species |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913861/ https://www.ncbi.nlm.nih.gov/pubmed/35277125 http://dx.doi.org/10.1186/s12866-022-02480-7 |
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