Cargando…

A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2

The new coronavirus (2019-nCoV) is an emerging pathogen that can cause severe respiratory infections in humans. It is worth noting that many of the affected COVID-19 patients have malignant tumors. In addition, cancer has been identified as a personal risk factor for COVID-19. Transmembrane protease...

Descripción completa

Detalles Bibliográficos
Autores principales: Meng, Yiming, Sun, Jing, Zhang, Guirong, Yu, Tao, Piao, Haozhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913938/
https://www.ncbi.nlm.nih.gov/pubmed/35281819
http://dx.doi.org/10.3389/fgene.2022.805880
_version_ 1784667572993523712
author Meng, Yiming
Sun, Jing
Zhang, Guirong
Yu, Tao
Piao, Haozhe
author_facet Meng, Yiming
Sun, Jing
Zhang, Guirong
Yu, Tao
Piao, Haozhe
author_sort Meng, Yiming
collection PubMed
description The new coronavirus (2019-nCoV) is an emerging pathogen that can cause severe respiratory infections in humans. It is worth noting that many of the affected COVID-19 patients have malignant tumors. In addition, cancer has been identified as a personal risk factor for COVID-19. Transmembrane proteaseserine-2 (TMPRSS2) is a crucial host protease that mediates S protein activation and initially promotes virus entry into host cells. Moreover, it is abnormally expressed in a variety of tumors. However, the systematic analysis of TMPRSS2 aberrations in human cancer remains to be elucidated. Here, we analyzed the genetic changes, RNA expression, and DNA methylation of TMPRSS2 in more than 30 tumors. It has been reported that TMPRSS2 is overexpressed in tumors such as prostate adenocarcinoma (PRAD), and in contrast, the expression of TMPRSS2 is decreased in tumors such as head and neck cancer (HNSC). In addition, TMPRSS2 low DNA methylation was also found in most of these TMPRSS2 high-expressing tumors in this study. Clinical studies have found that there is a significant correlation between the expression of TMPRSS2 and the prognosis of some tumor patients. The expression of TMPRSS2 is also related to the infiltration of cancer-related fibroblasts, and the potential pathways and functional mechanisms were analyzed through KEGG/GO enrichment. In the end, our study planned the genetic and epigenetic variation of TMPRSS2 in human malignant tumors for the first time and provided a relatively comprehensive understanding of the carcinogenic effects of TMPRSS2.
format Online
Article
Text
id pubmed-8913938
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-89139382022-03-12 A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2 Meng, Yiming Sun, Jing Zhang, Guirong Yu, Tao Piao, Haozhe Front Genet Genetics The new coronavirus (2019-nCoV) is an emerging pathogen that can cause severe respiratory infections in humans. It is worth noting that many of the affected COVID-19 patients have malignant tumors. In addition, cancer has been identified as a personal risk factor for COVID-19. Transmembrane proteaseserine-2 (TMPRSS2) is a crucial host protease that mediates S protein activation and initially promotes virus entry into host cells. Moreover, it is abnormally expressed in a variety of tumors. However, the systematic analysis of TMPRSS2 aberrations in human cancer remains to be elucidated. Here, we analyzed the genetic changes, RNA expression, and DNA methylation of TMPRSS2 in more than 30 tumors. It has been reported that TMPRSS2 is overexpressed in tumors such as prostate adenocarcinoma (PRAD), and in contrast, the expression of TMPRSS2 is decreased in tumors such as head and neck cancer (HNSC). In addition, TMPRSS2 low DNA methylation was also found in most of these TMPRSS2 high-expressing tumors in this study. Clinical studies have found that there is a significant correlation between the expression of TMPRSS2 and the prognosis of some tumor patients. The expression of TMPRSS2 is also related to the infiltration of cancer-related fibroblasts, and the potential pathways and functional mechanisms were analyzed through KEGG/GO enrichment. In the end, our study planned the genetic and epigenetic variation of TMPRSS2 in human malignant tumors for the first time and provided a relatively comprehensive understanding of the carcinogenic effects of TMPRSS2. Frontiers Media S.A. 2022-02-25 /pmc/articles/PMC8913938/ /pubmed/35281819 http://dx.doi.org/10.3389/fgene.2022.805880 Text en Copyright © 2022 Meng, Sun, Zhang, Yu and Piao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Meng, Yiming
Sun, Jing
Zhang, Guirong
Yu, Tao
Piao, Haozhe
A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title_full A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title_fullStr A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title_full_unstemmed A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title_short A Pan-Cancer In Silico Analysis of the COVID-19 Internalization Protease: Transmembrane Proteaseserine-2
title_sort pan-cancer in silico analysis of the covid-19 internalization protease: transmembrane proteaseserine-2
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8913938/
https://www.ncbi.nlm.nih.gov/pubmed/35281819
http://dx.doi.org/10.3389/fgene.2022.805880
work_keys_str_mv AT mengyiming apancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT sunjing apancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT zhangguirong apancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT yutao apancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT piaohaozhe apancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT mengyiming pancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT sunjing pancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT zhangguirong pancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT yutao pancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2
AT piaohaozhe pancancerinsilicoanalysisofthecovid19internalizationproteasetransmembraneproteaseserine2