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Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm

BACKGROUND: Prediabetes affects 1 in 3 US adults. Most are not receiving evidence-based interventions, so understanding how providers discuss prediabetes with patients will inform how to improve their care. OBJECTIVE: This study aimed to develop a natural language processing (NLP) algorithm using ma...

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Detalles Bibliográficos
Autores principales: Schwartz, Jessica L, Tseng, Eva, Maruthur, Nisa M, Rouhizadeh, Masoud
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914791/
https://www.ncbi.nlm.nih.gov/pubmed/35200154
http://dx.doi.org/10.2196/29803
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author Schwartz, Jessica L
Tseng, Eva
Maruthur, Nisa M
Rouhizadeh, Masoud
author_facet Schwartz, Jessica L
Tseng, Eva
Maruthur, Nisa M
Rouhizadeh, Masoud
author_sort Schwartz, Jessica L
collection PubMed
description BACKGROUND: Prediabetes affects 1 in 3 US adults. Most are not receiving evidence-based interventions, so understanding how providers discuss prediabetes with patients will inform how to improve their care. OBJECTIVE: This study aimed to develop a natural language processing (NLP) algorithm using machine learning techniques to identify discussions of prediabetes in narrative documentation. METHODS: We developed and applied a keyword search strategy to identify discussions of prediabetes in clinical documentation for patients with prediabetes. We manually reviewed matching notes to determine which represented actual prediabetes discussions. We applied 7 machine learning models against our manual annotation. RESULTS: Machine learning classifiers were able to achieve classification results that were close to human performance with up to 98% precision and recall to identify prediabetes discussions in clinical documentation. CONCLUSIONS: We demonstrated that prediabetes discussions can be accurately identified using an NLP algorithm. This approach can be used to understand and identify prediabetes management practices in primary care, thereby informing interventions to improve guideline-concordant care.
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spelling pubmed-89147912022-03-12 Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm Schwartz, Jessica L Tseng, Eva Maruthur, Nisa M Rouhizadeh, Masoud JMIR Med Inform Original Paper BACKGROUND: Prediabetes affects 1 in 3 US adults. Most are not receiving evidence-based interventions, so understanding how providers discuss prediabetes with patients will inform how to improve their care. OBJECTIVE: This study aimed to develop a natural language processing (NLP) algorithm using machine learning techniques to identify discussions of prediabetes in narrative documentation. METHODS: We developed and applied a keyword search strategy to identify discussions of prediabetes in clinical documentation for patients with prediabetes. We manually reviewed matching notes to determine which represented actual prediabetes discussions. We applied 7 machine learning models against our manual annotation. RESULTS: Machine learning classifiers were able to achieve classification results that were close to human performance with up to 98% precision and recall to identify prediabetes discussions in clinical documentation. CONCLUSIONS: We demonstrated that prediabetes discussions can be accurately identified using an NLP algorithm. This approach can be used to understand and identify prediabetes management practices in primary care, thereby informing interventions to improve guideline-concordant care. JMIR Publications 2022-02-24 /pmc/articles/PMC8914791/ /pubmed/35200154 http://dx.doi.org/10.2196/29803 Text en ©Jessica L Schwartz, Eva Tseng, Nisa M Maruthur, Masoud Rouhizadeh. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 24.02.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Schwartz, Jessica L
Tseng, Eva
Maruthur, Nisa M
Rouhizadeh, Masoud
Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title_full Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title_fullStr Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title_full_unstemmed Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title_short Identification of Prediabetes Discussions in Unstructured Clinical Documentation: Validation of a Natural Language Processing Algorithm
title_sort identification of prediabetes discussions in unstructured clinical documentation: validation of a natural language processing algorithm
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8914791/
https://www.ncbi.nlm.nih.gov/pubmed/35200154
http://dx.doi.org/10.2196/29803
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