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Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology
Immunohistochemistry for vascular network analysis plays a fundamental role in basic science, translational research and clinical practice. However, identifying vascularization in histological tissue images is time consuming and markedly depends on the operator’s experience. In this study, we presen...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8917109/ https://www.ncbi.nlm.nih.gov/pubmed/35171393 http://dx.doi.org/10.1007/s10439-022-02923-2 |
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author | Adamo, A. Bruno, A. Menallo, G. Francipane, M. G. Fazzari, M. Pirrone, R. Ardizzone, E. Wagner, W. R. D’Amore, A. |
author_facet | Adamo, A. Bruno, A. Menallo, G. Francipane, M. G. Fazzari, M. Pirrone, R. Ardizzone, E. Wagner, W. R. D’Amore, A. |
author_sort | Adamo, A. |
collection | PubMed |
description | Immunohistochemistry for vascular network analysis plays a fundamental role in basic science, translational research and clinical practice. However, identifying vascularization in histological tissue images is time consuming and markedly depends on the operator’s experience. In this study, we present “blood vessel detection—BVD”, an automatic algorithm for quantitative analysis of blood vessels in immunohistochemical images. BVD is based on extraction and analysis of low-level image features and spatial filtering techniques, which do not require a training phase. BVD algorithm performance was comparatively evaluated on histological sections from three different in vivo experiments. Collectively, 173 independent images were analyzed, and the algorithm's results were compared to those obtained by human operators. The developed BVD algorithm proved to be a robust and versatile tool, being able to quantify number, area, and spatial distribution of blood vessels within all three considered histologic datasets. BVD is provided as an open-source application working on different operating systems. BVD is supported by a user-friendly graphical interface designed to facilitate large-scale analysis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10439-022-02923-2. |
format | Online Article Text |
id | pubmed-8917109 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-89171092022-03-17 Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology Adamo, A. Bruno, A. Menallo, G. Francipane, M. G. Fazzari, M. Pirrone, R. Ardizzone, E. Wagner, W. R. D’Amore, A. Ann Biomed Eng Original Article Immunohistochemistry for vascular network analysis plays a fundamental role in basic science, translational research and clinical practice. However, identifying vascularization in histological tissue images is time consuming and markedly depends on the operator’s experience. In this study, we present “blood vessel detection—BVD”, an automatic algorithm for quantitative analysis of blood vessels in immunohistochemical images. BVD is based on extraction and analysis of low-level image features and spatial filtering techniques, which do not require a training phase. BVD algorithm performance was comparatively evaluated on histological sections from three different in vivo experiments. Collectively, 173 independent images were analyzed, and the algorithm's results were compared to those obtained by human operators. The developed BVD algorithm proved to be a robust and versatile tool, being able to quantify number, area, and spatial distribution of blood vessels within all three considered histologic datasets. BVD is provided as an open-source application working on different operating systems. BVD is supported by a user-friendly graphical interface designed to facilitate large-scale analysis. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10439-022-02923-2. Springer International Publishing 2022-02-16 2022 /pmc/articles/PMC8917109/ /pubmed/35171393 http://dx.doi.org/10.1007/s10439-022-02923-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Adamo, A. Bruno, A. Menallo, G. Francipane, M. G. Fazzari, M. Pirrone, R. Ardizzone, E. Wagner, W. R. D’Amore, A. Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title | Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title_full | Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title_fullStr | Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title_full_unstemmed | Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title_short | Blood Vessel Detection Algorithm for Tissue Engineering and Quantitative Histology |
title_sort | blood vessel detection algorithm for tissue engineering and quantitative histology |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8917109/ https://www.ncbi.nlm.nih.gov/pubmed/35171393 http://dx.doi.org/10.1007/s10439-022-02923-2 |
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