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VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces
High-level ab initio quantum chemical (QC) molecular potential energy surfaces (PESs) are crucial for accurately simulating molecular rotation-vibration spectra. Machine learning (ML) can help alleviate the cost of constructing such PESs, but requires access to the original ab initio PES data, namel...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8917215/ https://www.ncbi.nlm.nih.gov/pubmed/35277513 http://dx.doi.org/10.1038/s41597-022-01185-w |
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author | Zhang, Lina Zhang, Shuang Owens, Alec Yurchenko, Sergei N. Dral, Pavlo O. |
author_facet | Zhang, Lina Zhang, Shuang Owens, Alec Yurchenko, Sergei N. Dral, Pavlo O. |
author_sort | Zhang, Lina |
collection | PubMed |
description | High-level ab initio quantum chemical (QC) molecular potential energy surfaces (PESs) are crucial for accurately simulating molecular rotation-vibration spectra. Machine learning (ML) can help alleviate the cost of constructing such PESs, but requires access to the original ab initio PES data, namely potential energies computed on high-density grids of nuclear geometries. In this work, we present a new structured PES database called VIB5, which contains high-quality ab initio data on 5 small polyatomic molecules of astrophysical significance (CH(3)Cl, CH(4), SiH(4), CH(3)F, and NaOH). The VIB5 database is based on previously used PESs, which, however, are either publicly unavailable or lacking key information to make them suitable for ML applications. The VIB5 database provides tens of thousands of grid points for each molecule with theoretical best estimates of potential energies along with their constituent energy correction terms and a data-extraction script. In addition, new complementary QC calculations of energies and energy gradients have been performed to provide a consistent database, which, e.g., can be used for gradient-based ML methods. |
format | Online Article Text |
id | pubmed-8917215 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89172152022-03-28 VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces Zhang, Lina Zhang, Shuang Owens, Alec Yurchenko, Sergei N. Dral, Pavlo O. Sci Data Data Descriptor High-level ab initio quantum chemical (QC) molecular potential energy surfaces (PESs) are crucial for accurately simulating molecular rotation-vibration spectra. Machine learning (ML) can help alleviate the cost of constructing such PESs, but requires access to the original ab initio PES data, namely potential energies computed on high-density grids of nuclear geometries. In this work, we present a new structured PES database called VIB5, which contains high-quality ab initio data on 5 small polyatomic molecules of astrophysical significance (CH(3)Cl, CH(4), SiH(4), CH(3)F, and NaOH). The VIB5 database is based on previously used PESs, which, however, are either publicly unavailable or lacking key information to make them suitable for ML applications. The VIB5 database provides tens of thousands of grid points for each molecule with theoretical best estimates of potential energies along with their constituent energy correction terms and a data-extraction script. In addition, new complementary QC calculations of energies and energy gradients have been performed to provide a consistent database, which, e.g., can be used for gradient-based ML methods. Nature Publishing Group UK 2022-03-11 /pmc/articles/PMC8917215/ /pubmed/35277513 http://dx.doi.org/10.1038/s41597-022-01185-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Zhang, Lina Zhang, Shuang Owens, Alec Yurchenko, Sergei N. Dral, Pavlo O. VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title | VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title_full | VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title_fullStr | VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title_full_unstemmed | VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title_short | VIB5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
title_sort | vib5 database with accurate ab initio quantum chemical molecular potential energy surfaces |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8917215/ https://www.ncbi.nlm.nih.gov/pubmed/35277513 http://dx.doi.org/10.1038/s41597-022-01185-w |
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