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Drug-like Properties and Fraction Lipophilicity Index as a combined metric
Fraction Lipophicity Index (FLI) has been developed as a composite drug-like metric combining log P and log D in a weighted manner. In the present study, an extended data set confirmed the previously established drug-like FLI range 0-8 using two calculation systems for log P/log D assessment, the fr...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Association of Physical Chemists
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920096/ https://www.ncbi.nlm.nih.gov/pubmed/35300360 http://dx.doi.org/10.5599/admet.1022 |
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author | Tsantili-Kakoulidou, Anna Demopoulos, Vassilis J. |
author_facet | Tsantili-Kakoulidou, Anna Demopoulos, Vassilis J. |
author_sort | Tsantili-Kakoulidou, Anna |
collection | PubMed |
description | Fraction Lipophicity Index (FLI) has been developed as a composite drug-like metric combining log P and log D in a weighted manner. In the present study, an extended data set confirmed the previously established drug-like FLI range 0-8 using two calculation systems for log P/log D assessment, the freeware MedChem Designer and ClogP. The dataset was split into two classes according to the percentage of fraction absorbed (%FA) - class 1 including drugs with high to medium absorption levels and class 2 including poorly absorbed drugs. The FLI and FLI-C (ClogP based FLI) drug-like range covers 92 % and 91 % of class 1 drugs, respectively. Using MlogP, a narrower drug-like FLI-M range 0-7 was established, covering 91 % of class 1 drugs. The dependence of the degree of ionization to intrinsic lipophilicity within the FLI (FLI-C, FLI-M) drug-like range as well as the inter-relation between the other Ro5 properties (Mw, HD, HA) was explored to define drug-like / non-drug-like combinations as a safer alternative to single properties for drug candidates’ prioritization. In this sense, we propose a combined metric of Mw and the number of polar atoms (Mw/NO) to account for both size and polarity. Setting the value 50 as cutoff, a distinct differentiation between class 1 and class 2 drugs was obtained with Mw/NO>50 for more than 70 % of class 1 drugs, while the opposite was observed for class 2 drugs. |
format | Online Article Text |
id | pubmed-8920096 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Association of Physical Chemists |
record_format | MEDLINE/PubMed |
spelling | pubmed-89200962022-03-16 Drug-like Properties and Fraction Lipophilicity Index as a combined metric Tsantili-Kakoulidou, Anna Demopoulos, Vassilis J. ADMET DMPK Original Scientific Paper Fraction Lipophicity Index (FLI) has been developed as a composite drug-like metric combining log P and log D in a weighted manner. In the present study, an extended data set confirmed the previously established drug-like FLI range 0-8 using two calculation systems for log P/log D assessment, the freeware MedChem Designer and ClogP. The dataset was split into two classes according to the percentage of fraction absorbed (%FA) - class 1 including drugs with high to medium absorption levels and class 2 including poorly absorbed drugs. The FLI and FLI-C (ClogP based FLI) drug-like range covers 92 % and 91 % of class 1 drugs, respectively. Using MlogP, a narrower drug-like FLI-M range 0-7 was established, covering 91 % of class 1 drugs. The dependence of the degree of ionization to intrinsic lipophilicity within the FLI (FLI-C, FLI-M) drug-like range as well as the inter-relation between the other Ro5 properties (Mw, HD, HA) was explored to define drug-like / non-drug-like combinations as a safer alternative to single properties for drug candidates’ prioritization. In this sense, we propose a combined metric of Mw and the number of polar atoms (Mw/NO) to account for both size and polarity. Setting the value 50 as cutoff, a distinct differentiation between class 1 and class 2 drugs was obtained with Mw/NO>50 for more than 70 % of class 1 drugs, while the opposite was observed for class 2 drugs. International Association of Physical Chemists 2021-10-10 /pmc/articles/PMC8920096/ /pubmed/35300360 http://dx.doi.org/10.5599/admet.1022 Text en Copyright © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Original Scientific Paper Tsantili-Kakoulidou, Anna Demopoulos, Vassilis J. Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title | Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title_full | Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title_fullStr | Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title_full_unstemmed | Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title_short | Drug-like Properties and Fraction Lipophilicity Index as a combined metric |
title_sort | drug-like properties and fraction lipophilicity index as a combined metric |
topic | Original Scientific Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920096/ https://www.ncbi.nlm.nih.gov/pubmed/35300360 http://dx.doi.org/10.5599/admet.1022 |
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