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ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia
Acute myeloid leukaemia (AML) is a blood cancer with a heterogeneous genomic landscape. This study aimed to mine bioinformatics data generated by RNA sequencing to unveil an AML case transcriptome profile and identify novel therapeutic targets and markers. In this study, we have determined the trans...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920923/ https://www.ncbi.nlm.nih.gov/pubmed/35299609 http://dx.doi.org/10.1016/j.heliyon.2022.e09065 |
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author | El-Masry, Omar S. Alamri, Ali M. Alzahrani, Faisal Alsamman, Khaldoon |
author_facet | El-Masry, Omar S. Alamri, Ali M. Alzahrani, Faisal Alsamman, Khaldoon |
author_sort | El-Masry, Omar S. |
collection | PubMed |
description | Acute myeloid leukaemia (AML) is a blood cancer with a heterogeneous genomic landscape. This study aimed to mine bioinformatics data generated by RNA sequencing to unveil an AML case transcriptome profile and identify novel therapeutic targets and markers. In this study, we have determined the transcriptomic profile and analysed gene variants of an AML patient at the time of diagnosis and validated some genes by quantitative reverse transcriptase polymerase chain reaction. ADAMTS14, ARHGAP22, and ependymin-related protein 1 (EPDR1) were markedly upregulated compared to the corresponding control. In addition, novel exonic single-nucleotide and insertion/deletion variants were identified in these genes. Hence, ADAMTS14, ARHGAP22, and EPDR1 can be proposed as potential novel targets in AML, and their exact roles should be further explored. |
format | Online Article Text |
id | pubmed-8920923 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-89209232022-03-16 ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia El-Masry, Omar S. Alamri, Ali M. Alzahrani, Faisal Alsamman, Khaldoon Heliyon Case Report Acute myeloid leukaemia (AML) is a blood cancer with a heterogeneous genomic landscape. This study aimed to mine bioinformatics data generated by RNA sequencing to unveil an AML case transcriptome profile and identify novel therapeutic targets and markers. In this study, we have determined the transcriptomic profile and analysed gene variants of an AML patient at the time of diagnosis and validated some genes by quantitative reverse transcriptase polymerase chain reaction. ADAMTS14, ARHGAP22, and ependymin-related protein 1 (EPDR1) were markedly upregulated compared to the corresponding control. In addition, novel exonic single-nucleotide and insertion/deletion variants were identified in these genes. Hence, ADAMTS14, ARHGAP22, and EPDR1 can be proposed as potential novel targets in AML, and their exact roles should be further explored. Elsevier 2022-03-06 /pmc/articles/PMC8920923/ /pubmed/35299609 http://dx.doi.org/10.1016/j.heliyon.2022.e09065 Text en © 2022 Published by Elsevier Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Case Report El-Masry, Omar S. Alamri, Ali M. Alzahrani, Faisal Alsamman, Khaldoon ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title | ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title_full | ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title_fullStr | ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title_full_unstemmed | ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title_short | ADAMTS14, ARHGAP22, and EPDR1 as potential novel targets in acute myeloid leukaemia |
title_sort | adamts14, arhgap22, and epdr1 as potential novel targets in acute myeloid leukaemia |
topic | Case Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8920923/ https://www.ncbi.nlm.nih.gov/pubmed/35299609 http://dx.doi.org/10.1016/j.heliyon.2022.e09065 |
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