Cargando…

Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma

BACKGROUND: THO complex members (THOCs) are essential for mRNA processing, transcription elongation, mRNA export and genome integrity, which may be associated with tumor. However, the significance of THO complex members in Hepatocellular carcinoma (HCC) has not been clarified. METHODS: In this study...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xixi, Liu, Zefeng, Wei, Xin, Lin, Jie, Yang, Qiwei, Xie, Yingjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922240/
https://www.ncbi.nlm.nih.gov/pubmed/35300138
http://dx.doi.org/10.2147/IJGM.S349925
_version_ 1784669486144552960
author Li, Xixi
Liu, Zefeng
Wei, Xin
Lin, Jie
Yang, Qiwei
Xie, Yingjun
author_facet Li, Xixi
Liu, Zefeng
Wei, Xin
Lin, Jie
Yang, Qiwei
Xie, Yingjun
author_sort Li, Xixi
collection PubMed
description BACKGROUND: THO complex members (THOCs) are essential for mRNA processing, transcription elongation, mRNA export and genome integrity, which may be associated with tumor. However, the significance of THO complex members in Hepatocellular carcinoma (HCC) has not been clarified. METHODS: In this study, we investigated expression levels, clinicopathological correlation, diagnostic and prognostic value, disease associations, co-expression network, functional enrichment, genetic variation, drug sensitivity, molecular targets, and immune infiltration of THOCs in HCC using UALCAN, ICGC, HPA, Kaplan–Meier Plotter, The Open Targets Platform database, GeneMANIA, WebGestalt, GSCALite, LinkedOmics, TIMER. Meanwhile, the mRNA expression levels of THOCs in HCC were verified by qRT-PCR. RESULTS: THOCs were significantly up-regulated at the transcription level in HCC, and overexpression of THOCs was correlated with clinicopathological features. THOCs had potential diagnostic and prognostic value for HCC. THOCs could participate in apoptosis, regulate cell cycle, and were also involved in DNA damage response. Important cancer-related signaling pathways such as EMT, RAS/MAPK pathway and RKT pathway were also related to THOCs expression. In addition, the expression level of THOC1/2/6/7 was negatively correlated with drug resistance. And miRNA, kinase, and transcription factor targets associated with THOCs have been identified. Meanwhile, THOCs were associated with immune infiltration in HCC. CONCLUSION: Our study revealed that THO complex members have important clinical significance for HCC and have potential clinical utility in diagnosis, treatment and prognosis.
format Online
Article
Text
id pubmed-8922240
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-89222402022-03-16 Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma Li, Xixi Liu, Zefeng Wei, Xin Lin, Jie Yang, Qiwei Xie, Yingjun Int J Gen Med Original Research BACKGROUND: THO complex members (THOCs) are essential for mRNA processing, transcription elongation, mRNA export and genome integrity, which may be associated with tumor. However, the significance of THO complex members in Hepatocellular carcinoma (HCC) has not been clarified. METHODS: In this study, we investigated expression levels, clinicopathological correlation, diagnostic and prognostic value, disease associations, co-expression network, functional enrichment, genetic variation, drug sensitivity, molecular targets, and immune infiltration of THOCs in HCC using UALCAN, ICGC, HPA, Kaplan–Meier Plotter, The Open Targets Platform database, GeneMANIA, WebGestalt, GSCALite, LinkedOmics, TIMER. Meanwhile, the mRNA expression levels of THOCs in HCC were verified by qRT-PCR. RESULTS: THOCs were significantly up-regulated at the transcription level in HCC, and overexpression of THOCs was correlated with clinicopathological features. THOCs had potential diagnostic and prognostic value for HCC. THOCs could participate in apoptosis, regulate cell cycle, and were also involved in DNA damage response. Important cancer-related signaling pathways such as EMT, RAS/MAPK pathway and RKT pathway were also related to THOCs expression. In addition, the expression level of THOC1/2/6/7 was negatively correlated with drug resistance. And miRNA, kinase, and transcription factor targets associated with THOCs have been identified. Meanwhile, THOCs were associated with immune infiltration in HCC. CONCLUSION: Our study revealed that THO complex members have important clinical significance for HCC and have potential clinical utility in diagnosis, treatment and prognosis. Dove 2022-03-08 /pmc/articles/PMC8922240/ /pubmed/35300138 http://dx.doi.org/10.2147/IJGM.S349925 Text en © 2022 Li et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Li, Xixi
Liu, Zefeng
Wei, Xin
Lin, Jie
Yang, Qiwei
Xie, Yingjun
Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title_full Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title_fullStr Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title_full_unstemmed Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title_short Comprehensive Analysis of the Expression and Clinical Significance of THO Complex Members in Hepatocellular Carcinoma
title_sort comprehensive analysis of the expression and clinical significance of tho complex members in hepatocellular carcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922240/
https://www.ncbi.nlm.nih.gov/pubmed/35300138
http://dx.doi.org/10.2147/IJGM.S349925
work_keys_str_mv AT lixixi comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma
AT liuzefeng comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma
AT weixin comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma
AT linjie comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma
AT yangqiwei comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma
AT xieyingjun comprehensiveanalysisoftheexpressionandclinicalsignificanceofthocomplexmembersinhepatocellularcarcinoma