Cargando…

Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome

BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risk...

Descripción completa

Detalles Bibliográficos
Autores principales: Shinko, Yutaka, Okazaki, Satoshi, Otsuka, Ikuo, Horai, Tadasu, Kim, Saehyeon, Tanifuji, Takaki, Hishimoto, Akitoyo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Blackwell Publishing Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922957/
https://www.ncbi.nlm.nih.gov/pubmed/35092358
http://dx.doi.org/10.1002/mgg3.1876
_version_ 1784669598616911872
author Shinko, Yutaka
Okazaki, Satoshi
Otsuka, Ikuo
Horai, Tadasu
Kim, Saehyeon
Tanifuji, Takaki
Hishimoto, Akitoyo
author_facet Shinko, Yutaka
Okazaki, Satoshi
Otsuka, Ikuo
Horai, Tadasu
Kim, Saehyeon
Tanifuji, Takaki
Hishimoto, Akitoyo
author_sort Shinko, Yutaka
collection PubMed
description BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risks associated with biological aging. In this study, we examined changes in biological ages in NCBRS to provide insights into the prognosis and health risks of NCBRS. METHODS: We used a publicly available dataset to examine biological aging in NCBRS using DNAm‐based epigenetic ages, such as PhenoAge and GrimAge, as well as DNAm‐based estimator of telomere length (DNAmTL). We investigated 12 cases, clinically diagnosed as NCBRS, and 27 controls. RESULTS: Compared to controls, NCBRS cases exhibited significantly accelerated PhenoAge and GrimAge as well as significantly shortened DNAmTL. CONCLUSION: These results suggest an acceleration of biological aging in NCBRS and provide insights into the prognosis and health risks of NCBRS.
format Online
Article
Text
id pubmed-8922957
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Blackwell Publishing Ltd
record_format MEDLINE/PubMed
spelling pubmed-89229572022-03-21 Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome Shinko, Yutaka Okazaki, Satoshi Otsuka, Ikuo Horai, Tadasu Kim, Saehyeon Tanifuji, Takaki Hishimoto, Akitoyo Mol Genet Genomic Med Original Articles BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risks associated with biological aging. In this study, we examined changes in biological ages in NCBRS to provide insights into the prognosis and health risks of NCBRS. METHODS: We used a publicly available dataset to examine biological aging in NCBRS using DNAm‐based epigenetic ages, such as PhenoAge and GrimAge, as well as DNAm‐based estimator of telomere length (DNAmTL). We investigated 12 cases, clinically diagnosed as NCBRS, and 27 controls. RESULTS: Compared to controls, NCBRS cases exhibited significantly accelerated PhenoAge and GrimAge as well as significantly shortened DNAmTL. CONCLUSION: These results suggest an acceleration of biological aging in NCBRS and provide insights into the prognosis and health risks of NCBRS. Blackwell Publishing Ltd 2022-01-29 /pmc/articles/PMC8922957/ /pubmed/35092358 http://dx.doi.org/10.1002/mgg3.1876 Text en © 2022 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Shinko, Yutaka
Okazaki, Satoshi
Otsuka, Ikuo
Horai, Tadasu
Kim, Saehyeon
Tanifuji, Takaki
Hishimoto, Akitoyo
Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title_full Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title_fullStr Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title_full_unstemmed Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title_short Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
title_sort accelerated epigenetic age and shortened telomere length based on dna methylation in nicolaides–baraitser syndrome
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922957/
https://www.ncbi.nlm.nih.gov/pubmed/35092358
http://dx.doi.org/10.1002/mgg3.1876
work_keys_str_mv AT shinkoyutaka acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT okazakisatoshi acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT otsukaikuo acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT horaitadasu acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT kimsaehyeon acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT tanifujitakaki acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome
AT hishimotoakitoyo acceleratedepigeneticageandshortenedtelomerelengthbasedondnamethylationinnicolaidesbaraitsersyndrome