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Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome
BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risk...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Blackwell Publishing Ltd
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922957/ https://www.ncbi.nlm.nih.gov/pubmed/35092358 http://dx.doi.org/10.1002/mgg3.1876 |
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author | Shinko, Yutaka Okazaki, Satoshi Otsuka, Ikuo Horai, Tadasu Kim, Saehyeon Tanifuji, Takaki Hishimoto, Akitoyo |
author_facet | Shinko, Yutaka Okazaki, Satoshi Otsuka, Ikuo Horai, Tadasu Kim, Saehyeon Tanifuji, Takaki Hishimoto, Akitoyo |
author_sort | Shinko, Yutaka |
collection | PubMed |
description | BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risks associated with biological aging. In this study, we examined changes in biological ages in NCBRS to provide insights into the prognosis and health risks of NCBRS. METHODS: We used a publicly available dataset to examine biological aging in NCBRS using DNAm‐based epigenetic ages, such as PhenoAge and GrimAge, as well as DNAm‐based estimator of telomere length (DNAmTL). We investigated 12 cases, clinically diagnosed as NCBRS, and 27 controls. RESULTS: Compared to controls, NCBRS cases exhibited significantly accelerated PhenoAge and GrimAge as well as significantly shortened DNAmTL. CONCLUSION: These results suggest an acceleration of biological aging in NCBRS and provide insights into the prognosis and health risks of NCBRS. |
format | Online Article Text |
id | pubmed-8922957 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Blackwell Publishing Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-89229572022-03-21 Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome Shinko, Yutaka Okazaki, Satoshi Otsuka, Ikuo Horai, Tadasu Kim, Saehyeon Tanifuji, Takaki Hishimoto, Akitoyo Mol Genet Genomic Med Original Articles BACKGROUND: Nicolaides–Baraitser syndrome (NCBRS) is a rare disorder characterized by neurodevelopmental delays, seizures, and diverse physical characteristics. The DNA methylation (DNAm) profile in NCBRS is significantly different. DNAm is linked to the biological aging of cells and the health risks associated with biological aging. In this study, we examined changes in biological ages in NCBRS to provide insights into the prognosis and health risks of NCBRS. METHODS: We used a publicly available dataset to examine biological aging in NCBRS using DNAm‐based epigenetic ages, such as PhenoAge and GrimAge, as well as DNAm‐based estimator of telomere length (DNAmTL). We investigated 12 cases, clinically diagnosed as NCBRS, and 27 controls. RESULTS: Compared to controls, NCBRS cases exhibited significantly accelerated PhenoAge and GrimAge as well as significantly shortened DNAmTL. CONCLUSION: These results suggest an acceleration of biological aging in NCBRS and provide insights into the prognosis and health risks of NCBRS. Blackwell Publishing Ltd 2022-01-29 /pmc/articles/PMC8922957/ /pubmed/35092358 http://dx.doi.org/10.1002/mgg3.1876 Text en © 2022 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Shinko, Yutaka Okazaki, Satoshi Otsuka, Ikuo Horai, Tadasu Kim, Saehyeon Tanifuji, Takaki Hishimoto, Akitoyo Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title | Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title_full | Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title_fullStr | Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title_full_unstemmed | Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title_short | Accelerated epigenetic age and shortened telomere length based on DNA methylation in Nicolaides–Baraitser syndrome |
title_sort | accelerated epigenetic age and shortened telomere length based on dna methylation in nicolaides–baraitser syndrome |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8922957/ https://www.ncbi.nlm.nih.gov/pubmed/35092358 http://dx.doi.org/10.1002/mgg3.1876 |
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