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Optimal Bayesian design for model discrimination via classification
Performing optimal Bayesian design for discriminating between competing models is computationally intensive as it involves estimating posterior model probabilities for thousands of simulated data sets. This issue is compounded further when the likelihood functions for the rival models are computatio...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924111/ https://www.ncbi.nlm.nih.gov/pubmed/35310544 http://dx.doi.org/10.1007/s11222-022-10078-2 |
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author | Hainy, Markus Price, David J. Restif, Olivier Drovandi, Christopher |
author_facet | Hainy, Markus Price, David J. Restif, Olivier Drovandi, Christopher |
author_sort | Hainy, Markus |
collection | PubMed |
description | Performing optimal Bayesian design for discriminating between competing models is computationally intensive as it involves estimating posterior model probabilities for thousands of simulated data sets. This issue is compounded further when the likelihood functions for the rival models are computationally expensive. A new approach using supervised classification methods is developed to perform Bayesian optimal model discrimination design. This approach requires considerably fewer simulations from the candidate models than previous approaches using approximate Bayesian computation. Further, it is easy to assess the performance of the optimal design through the misclassification error rate. The approach is particularly useful in the presence of models with intractable likelihoods but can also provide computational advantages when the likelihoods are manageable. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11222-022-10078-2. |
format | Online Article Text |
id | pubmed-8924111 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-89241112022-03-17 Optimal Bayesian design for model discrimination via classification Hainy, Markus Price, David J. Restif, Olivier Drovandi, Christopher Stat Comput Article Performing optimal Bayesian design for discriminating between competing models is computationally intensive as it involves estimating posterior model probabilities for thousands of simulated data sets. This issue is compounded further when the likelihood functions for the rival models are computationally expensive. A new approach using supervised classification methods is developed to perform Bayesian optimal model discrimination design. This approach requires considerably fewer simulations from the candidate models than previous approaches using approximate Bayesian computation. Further, it is easy to assess the performance of the optimal design through the misclassification error rate. The approach is particularly useful in the presence of models with intractable likelihoods but can also provide computational advantages when the likelihoods are manageable. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11222-022-10078-2. Springer US 2022-02-22 2022 /pmc/articles/PMC8924111/ /pubmed/35310544 http://dx.doi.org/10.1007/s11222-022-10078-2 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Hainy, Markus Price, David J. Restif, Olivier Drovandi, Christopher Optimal Bayesian design for model discrimination via classification |
title | Optimal Bayesian design for model discrimination via classification |
title_full | Optimal Bayesian design for model discrimination via classification |
title_fullStr | Optimal Bayesian design for model discrimination via classification |
title_full_unstemmed | Optimal Bayesian design for model discrimination via classification |
title_short | Optimal Bayesian design for model discrimination via classification |
title_sort | optimal bayesian design for model discrimination via classification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924111/ https://www.ncbi.nlm.nih.gov/pubmed/35310544 http://dx.doi.org/10.1007/s11222-022-10078-2 |
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