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Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes

In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from bl...

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Autores principales: Kohaar, Indu, Zhang, Xijun, Tan, Shyh-Han, Nousome, Darryl, Babcock, Kevin, Ravindranath, Lakshmi, Sukumar, Gauthaman, Mcgrath-Martinez, Elisa, Rosenberger, John, Alba, Camille, Ali, Amina, Young, Denise, Chen, Yongmei, Cullen, Jennifer, Rosner, Inger L., Sesterhenn, Isabell A., Dobi, Albert, Chesnut, Gregory, Turner, Clesson, Dalgard, Clifton, Wilkerson, Matthew D., Pollard, Harvey B., Srivastava, Shiv, Petrovics, Gyorgy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924169/
https://www.ncbi.nlm.nih.gov/pubmed/35292633
http://dx.doi.org/10.1038/s41467-022-28945-x
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author Kohaar, Indu
Zhang, Xijun
Tan, Shyh-Han
Nousome, Darryl
Babcock, Kevin
Ravindranath, Lakshmi
Sukumar, Gauthaman
Mcgrath-Martinez, Elisa
Rosenberger, John
Alba, Camille
Ali, Amina
Young, Denise
Chen, Yongmei
Cullen, Jennifer
Rosner, Inger L.
Sesterhenn, Isabell A.
Dobi, Albert
Chesnut, Gregory
Turner, Clesson
Dalgard, Clifton
Wilkerson, Matthew D.
Pollard, Harvey B.
Srivastava, Shiv
Petrovics, Gyorgy
author_facet Kohaar, Indu
Zhang, Xijun
Tan, Shyh-Han
Nousome, Darryl
Babcock, Kevin
Ravindranath, Lakshmi
Sukumar, Gauthaman
Mcgrath-Martinez, Elisa
Rosenberger, John
Alba, Camille
Ali, Amina
Young, Denise
Chen, Yongmei
Cullen, Jennifer
Rosner, Inger L.
Sesterhenn, Isabell A.
Dobi, Albert
Chesnut, Gregory
Turner, Clesson
Dalgard, Clifton
Wilkerson, Matthew D.
Pollard, Harvey B.
Srivastava, Shiv
Petrovics, Gyorgy
author_sort Kohaar, Indu
collection PubMed
description In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from blood DNA of a matched cohort of patients with primary prostate cancer comprising of 300 African American and 300 European Ancestry prostate cancer patients, to determine whether the mutation status can enhance patient stratification for specific targeted therapies. Here, we show that only 13 of the 46 DDRGs identified with pathogenic/likely pathogenic mutations are present in both African American and European ancestry patients. Importantly, RAD family genes (RAD51, RAD54L, RAD54B), which are potentially targetable, as well as PMS2 and BRCA1, are among the most frequently mutated DDRGs in African American, but not in European Ancestry patients.
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spelling pubmed-89241692022-04-01 Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes Kohaar, Indu Zhang, Xijun Tan, Shyh-Han Nousome, Darryl Babcock, Kevin Ravindranath, Lakshmi Sukumar, Gauthaman Mcgrath-Martinez, Elisa Rosenberger, John Alba, Camille Ali, Amina Young, Denise Chen, Yongmei Cullen, Jennifer Rosner, Inger L. Sesterhenn, Isabell A. Dobi, Albert Chesnut, Gregory Turner, Clesson Dalgard, Clifton Wilkerson, Matthew D. Pollard, Harvey B. Srivastava, Shiv Petrovics, Gyorgy Nat Commun Article In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from blood DNA of a matched cohort of patients with primary prostate cancer comprising of 300 African American and 300 European Ancestry prostate cancer patients, to determine whether the mutation status can enhance patient stratification for specific targeted therapies. Here, we show that only 13 of the 46 DDRGs identified with pathogenic/likely pathogenic mutations are present in both African American and European ancestry patients. Importantly, RAD family genes (RAD51, RAD54L, RAD54B), which are potentially targetable, as well as PMS2 and BRCA1, are among the most frequently mutated DDRGs in African American, but not in European Ancestry patients. Nature Publishing Group UK 2022-03-15 /pmc/articles/PMC8924169/ /pubmed/35292633 http://dx.doi.org/10.1038/s41467-022-28945-x Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Kohaar, Indu
Zhang, Xijun
Tan, Shyh-Han
Nousome, Darryl
Babcock, Kevin
Ravindranath, Lakshmi
Sukumar, Gauthaman
Mcgrath-Martinez, Elisa
Rosenberger, John
Alba, Camille
Ali, Amina
Young, Denise
Chen, Yongmei
Cullen, Jennifer
Rosner, Inger L.
Sesterhenn, Isabell A.
Dobi, Albert
Chesnut, Gregory
Turner, Clesson
Dalgard, Clifton
Wilkerson, Matthew D.
Pollard, Harvey B.
Srivastava, Shiv
Petrovics, Gyorgy
Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title_full Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title_fullStr Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title_full_unstemmed Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title_short Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
title_sort germline mutation landscape of dna damage repair genes in african americans with prostate cancer highlights potentially targetable rad genes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924169/
https://www.ncbi.nlm.nih.gov/pubmed/35292633
http://dx.doi.org/10.1038/s41467-022-28945-x
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