Cargando…
Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes
In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from bl...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924169/ https://www.ncbi.nlm.nih.gov/pubmed/35292633 http://dx.doi.org/10.1038/s41467-022-28945-x |
_version_ | 1784669791031656448 |
---|---|
author | Kohaar, Indu Zhang, Xijun Tan, Shyh-Han Nousome, Darryl Babcock, Kevin Ravindranath, Lakshmi Sukumar, Gauthaman Mcgrath-Martinez, Elisa Rosenberger, John Alba, Camille Ali, Amina Young, Denise Chen, Yongmei Cullen, Jennifer Rosner, Inger L. Sesterhenn, Isabell A. Dobi, Albert Chesnut, Gregory Turner, Clesson Dalgard, Clifton Wilkerson, Matthew D. Pollard, Harvey B. Srivastava, Shiv Petrovics, Gyorgy |
author_facet | Kohaar, Indu Zhang, Xijun Tan, Shyh-Han Nousome, Darryl Babcock, Kevin Ravindranath, Lakshmi Sukumar, Gauthaman Mcgrath-Martinez, Elisa Rosenberger, John Alba, Camille Ali, Amina Young, Denise Chen, Yongmei Cullen, Jennifer Rosner, Inger L. Sesterhenn, Isabell A. Dobi, Albert Chesnut, Gregory Turner, Clesson Dalgard, Clifton Wilkerson, Matthew D. Pollard, Harvey B. Srivastava, Shiv Petrovics, Gyorgy |
author_sort | Kohaar, Indu |
collection | PubMed |
description | In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from blood DNA of a matched cohort of patients with primary prostate cancer comprising of 300 African American and 300 European Ancestry prostate cancer patients, to determine whether the mutation status can enhance patient stratification for specific targeted therapies. Here, we show that only 13 of the 46 DDRGs identified with pathogenic/likely pathogenic mutations are present in both African American and European ancestry patients. Importantly, RAD family genes (RAD51, RAD54L, RAD54B), which are potentially targetable, as well as PMS2 and BRCA1, are among the most frequently mutated DDRGs in African American, but not in European Ancestry patients. |
format | Online Article Text |
id | pubmed-8924169 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-89241692022-04-01 Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes Kohaar, Indu Zhang, Xijun Tan, Shyh-Han Nousome, Darryl Babcock, Kevin Ravindranath, Lakshmi Sukumar, Gauthaman Mcgrath-Martinez, Elisa Rosenberger, John Alba, Camille Ali, Amina Young, Denise Chen, Yongmei Cullen, Jennifer Rosner, Inger L. Sesterhenn, Isabell A. Dobi, Albert Chesnut, Gregory Turner, Clesson Dalgard, Clifton Wilkerson, Matthew D. Pollard, Harvey B. Srivastava, Shiv Petrovics, Gyorgy Nat Commun Article In prostate cancer, emerging data highlight the role of DNA damage repair genes (DDRGs) in aggressive forms of the disease. However, DDRG mutations in African American men are not yet fully defined. Here, we profile germline mutations in all known DDRGs (N = 276) using whole genome sequences from blood DNA of a matched cohort of patients with primary prostate cancer comprising of 300 African American and 300 European Ancestry prostate cancer patients, to determine whether the mutation status can enhance patient stratification for specific targeted therapies. Here, we show that only 13 of the 46 DDRGs identified with pathogenic/likely pathogenic mutations are present in both African American and European ancestry patients. Importantly, RAD family genes (RAD51, RAD54L, RAD54B), which are potentially targetable, as well as PMS2 and BRCA1, are among the most frequently mutated DDRGs in African American, but not in European Ancestry patients. Nature Publishing Group UK 2022-03-15 /pmc/articles/PMC8924169/ /pubmed/35292633 http://dx.doi.org/10.1038/s41467-022-28945-x Text en © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kohaar, Indu Zhang, Xijun Tan, Shyh-Han Nousome, Darryl Babcock, Kevin Ravindranath, Lakshmi Sukumar, Gauthaman Mcgrath-Martinez, Elisa Rosenberger, John Alba, Camille Ali, Amina Young, Denise Chen, Yongmei Cullen, Jennifer Rosner, Inger L. Sesterhenn, Isabell A. Dobi, Albert Chesnut, Gregory Turner, Clesson Dalgard, Clifton Wilkerson, Matthew D. Pollard, Harvey B. Srivastava, Shiv Petrovics, Gyorgy Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title | Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title_full | Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title_fullStr | Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title_full_unstemmed | Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title_short | Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes |
title_sort | germline mutation landscape of dna damage repair genes in african americans with prostate cancer highlights potentially targetable rad genes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924169/ https://www.ncbi.nlm.nih.gov/pubmed/35292633 http://dx.doi.org/10.1038/s41467-022-28945-x |
work_keys_str_mv | AT kohaarindu germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT zhangxijun germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT tanshyhhan germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT nousomedarryl germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT babcockkevin germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT ravindranathlakshmi germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT sukumargauthaman germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT mcgrathmartinezelisa germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT rosenbergerjohn germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT albacamille germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT aliamina germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT youngdenise germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT chenyongmei germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT cullenjennifer germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT rosneringerl germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT sesterhennisabella germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT dobialbert germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT chesnutgregory germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT turnerclesson germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT dalgardclifton germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT wilkersonmatthewd germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT pollardharveyb germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT srivastavashiv germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes AT petrovicsgyorgy germlinemutationlandscapeofdnadamagerepairgenesinafricanamericanswithprostatecancerhighlightspotentiallytargetableradgenes |