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Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm

Seizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between in...

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Autores principales: Pinto, Mauro, Coelho, Tiago, Leal, Adriana, Lopes, Fábio, Dourado, António, Martins, Pedro, Teixeira, César
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924190/
https://www.ncbi.nlm.nih.gov/pubmed/35292691
http://dx.doi.org/10.1038/s41598-022-08322-w
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author Pinto, Mauro
Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César
author_facet Pinto, Mauro
Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César
author_sort Pinto, Mauro
collection PubMed
description Seizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between inter-ictal brain activity and the seizure discharge. This period is typically a fixed interval, with some recent studies reporting the evaluation of different patient-specific pre-ictal intervals. Recently, researchers have aimed to determine the pre-ictal period, a transition stage between regular brain activity and a seizure. Authors have been using deep learning models given the ability of such models to automatically perform pre-processing, feature extraction, classification, and handling temporal and spatial dependencies. As these approaches create black-box models, clinicians may not have sufficient trust to use them in high-stake decisions. By considering these problems, we developed an evolutionary seizure prediction model that identifies the best set of features while automatically searching for the pre-ictal period and accounting for patient comfort. This methodology provides patient-specific interpretable insights, which might contribute to a better understanding of seizure generation processes and explain the algorithm’s decisions. We tested our methodology on 238 seizures and 3687 h of continuous data, recorded on scalp recordings from 93 patients with several types of focal and generalised epilepsies. We compared the results with a seizure surrogate predictor and obtained a performance above chance for 32% patients. We also compared our results with a control method based on the standard machine learning pipeline (pre-processing, feature extraction, classifier training, and post-processing), where the control marginally outperformed our approach by validating 35% of the patients. In total, 54 patients performed above chance for at least one method: our methodology or the control one. Of these 54 patients, 21 ([Formula: see text] 38%) were solely validated by our methodology, while 24 ([Formula: see text] 44%) were only validated by the control method. These findings may evidence the need for different methodologies concerning different patients.
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spelling pubmed-89241902022-03-17 Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm Pinto, Mauro Coelho, Tiago Leal, Adriana Lopes, Fábio Dourado, António Martins, Pedro Teixeira, César Sci Rep Article Seizure prediction might be the solution to tackle the apparent unpredictability of seizures in patients with drug-resistant epilepsy, which comprise about a third of all patients with epilepsy. Designing seizure prediction models involves defining the pre-ictal period, a transition stage between inter-ictal brain activity and the seizure discharge. This period is typically a fixed interval, with some recent studies reporting the evaluation of different patient-specific pre-ictal intervals. Recently, researchers have aimed to determine the pre-ictal period, a transition stage between regular brain activity and a seizure. Authors have been using deep learning models given the ability of such models to automatically perform pre-processing, feature extraction, classification, and handling temporal and spatial dependencies. As these approaches create black-box models, clinicians may not have sufficient trust to use them in high-stake decisions. By considering these problems, we developed an evolutionary seizure prediction model that identifies the best set of features while automatically searching for the pre-ictal period and accounting for patient comfort. This methodology provides patient-specific interpretable insights, which might contribute to a better understanding of seizure generation processes and explain the algorithm’s decisions. We tested our methodology on 238 seizures and 3687 h of continuous data, recorded on scalp recordings from 93 patients with several types of focal and generalised epilepsies. We compared the results with a seizure surrogate predictor and obtained a performance above chance for 32% patients. We also compared our results with a control method based on the standard machine learning pipeline (pre-processing, feature extraction, classifier training, and post-processing), where the control marginally outperformed our approach by validating 35% of the patients. In total, 54 patients performed above chance for at least one method: our methodology or the control one. Of these 54 patients, 21 ([Formula: see text] 38%) were solely validated by our methodology, while 24 ([Formula: see text] 44%) were only validated by the control method. These findings may evidence the need for different methodologies concerning different patients. Nature Publishing Group UK 2022-03-15 /pmc/articles/PMC8924190/ /pubmed/35292691 http://dx.doi.org/10.1038/s41598-022-08322-w Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Pinto, Mauro
Coelho, Tiago
Leal, Adriana
Lopes, Fábio
Dourado, António
Martins, Pedro
Teixeira, César
Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_full Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_fullStr Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_full_unstemmed Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_short Interpretable EEG seizure prediction using a multiobjective evolutionary algorithm
title_sort interpretable eeg seizure prediction using a multiobjective evolutionary algorithm
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924190/
https://www.ncbi.nlm.nih.gov/pubmed/35292691
http://dx.doi.org/10.1038/s41598-022-08322-w
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