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Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy

N6-methyladenosine (m(6)A) has emerged as one of the most important modifications of RNA. Based on the expression of 23 different modes of m(6)A regulatory factors, we identified three different m(6)A modification patterns in bladder cancer. The effects of the three different modes of m(6)A modifica...

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Autores principales: Deng, Hongyu, Tang, Faqing, Zhou, Ming, Shan, Dongyong, Chen, Xingyu, Cao, Ke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924666/
https://www.ncbi.nlm.nih.gov/pubmed/35311150
http://dx.doi.org/10.3389/fonc.2022.820242
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author Deng, Hongyu
Tang, Faqing
Zhou, Ming
Shan, Dongyong
Chen, Xingyu
Cao, Ke
author_facet Deng, Hongyu
Tang, Faqing
Zhou, Ming
Shan, Dongyong
Chen, Xingyu
Cao, Ke
author_sort Deng, Hongyu
collection PubMed
description N6-methyladenosine (m(6)A) has emerged as one of the most important modifications of RNA. Based on the expression of 23 different modes of m(6)A regulatory factors, we identified three different m(6)A modification patterns in bladder cancer. The effects of the three different modes of m(6)A modification on clinicopathological characteristics, immune cell infiltration levels and expression levels of immune checkpoint genes were comprehensively analyzed. In addition, the effects of different modes of m(6)A modification on the therapeutic efficacy of anti-PD-L1 immunotherapy (atezolizumab) are also discussed. Our results confirm that m(6)A methylation plays an important role in immune cell recruitment in the tumor microenvironment of bladder cancer, which influences the efficacy of anti-PD-L1 therapy for bladder cancer. We further confirmed the important role of FTO protein in the biological function of bladder cancer cells by performing in vitro experiments. FTO functions as an oncogene in bladder cancer cells, and upon FTO knockdown, the level of m(6)A enzyme activity in bladder cancer cells was significantly increased, apoptosis was increased, and cell proliferation and cell invasion were reduced. In addition, our study also confirmed that K216H and K216E are probably important targets for regulating FTO. We provide new insights into the regulatory pathways of the immune microenvironment and the methylation function of m(6)A in bladder cancer, which will help in designing novel diagnostic methods, prognostic tools, and therapeutic targets.
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spelling pubmed-89246662022-03-17 Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy Deng, Hongyu Tang, Faqing Zhou, Ming Shan, Dongyong Chen, Xingyu Cao, Ke Front Oncol Oncology N6-methyladenosine (m(6)A) has emerged as one of the most important modifications of RNA. Based on the expression of 23 different modes of m(6)A regulatory factors, we identified three different m(6)A modification patterns in bladder cancer. The effects of the three different modes of m(6)A modification on clinicopathological characteristics, immune cell infiltration levels and expression levels of immune checkpoint genes were comprehensively analyzed. In addition, the effects of different modes of m(6)A modification on the therapeutic efficacy of anti-PD-L1 immunotherapy (atezolizumab) are also discussed. Our results confirm that m(6)A methylation plays an important role in immune cell recruitment in the tumor microenvironment of bladder cancer, which influences the efficacy of anti-PD-L1 therapy for bladder cancer. We further confirmed the important role of FTO protein in the biological function of bladder cancer cells by performing in vitro experiments. FTO functions as an oncogene in bladder cancer cells, and upon FTO knockdown, the level of m(6)A enzyme activity in bladder cancer cells was significantly increased, apoptosis was increased, and cell proliferation and cell invasion were reduced. In addition, our study also confirmed that K216H and K216E are probably important targets for regulating FTO. We provide new insights into the regulatory pathways of the immune microenvironment and the methylation function of m(6)A in bladder cancer, which will help in designing novel diagnostic methods, prognostic tools, and therapeutic targets. Frontiers Media S.A. 2022-03-02 /pmc/articles/PMC8924666/ /pubmed/35311150 http://dx.doi.org/10.3389/fonc.2022.820242 Text en Copyright © 2022 Deng, Tang, Zhou, Shan, Chen and Cao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Deng, Hongyu
Tang, Faqing
Zhou, Ming
Shan, Dongyong
Chen, Xingyu
Cao, Ke
Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title_full Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title_fullStr Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title_full_unstemmed Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title_short Identification and Validation of N6-Methyladenosine-Related Biomarkers for Bladder Cancer: Implications for Immunotherapy
title_sort identification and validation of n6-methyladenosine-related biomarkers for bladder cancer: implications for immunotherapy
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8924666/
https://www.ncbi.nlm.nih.gov/pubmed/35311150
http://dx.doi.org/10.3389/fonc.2022.820242
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