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Karyological and nuclear DNA content variation of the genus Asparagus

Asparagus wild relatives could be a promising possibility to extent the genetic variability of garden asparagus and for new cultivars with favorable traits such as high yield stability, disease resistance and stress tolerance. In order to achieve an efficient use in breeding, a detailed cytogenetic...

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Autores principales: Plath, Susann, Klocke, Evelyn, Nothnagel, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926174/
https://www.ncbi.nlm.nih.gov/pubmed/35294505
http://dx.doi.org/10.1371/journal.pone.0265405
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author Plath, Susann
Klocke, Evelyn
Nothnagel, Thomas
author_facet Plath, Susann
Klocke, Evelyn
Nothnagel, Thomas
author_sort Plath, Susann
collection PubMed
description Asparagus wild relatives could be a promising possibility to extent the genetic variability of garden asparagus and for new cultivars with favorable traits such as high yield stability, disease resistance and stress tolerance. In order to achieve an efficient use in breeding, a detailed cytogenetic characterization of the accessions is necessary. This study worked on 35 Asparagus accessions, including A. officinalis cultivars (‘Darlise’, ‘Ravel’ and ‘Steiners Violetta’) and Asparagus wild relatives, for which the number of chromosomes, their size, the nuclear DNA content, and the genomic distribution of 5S and 45S rDNA were analyzed. Different ploidy levels (diploid, triploid, tetraploid, pentaploid and hexaploid) were found. Furthermore, the size of the chromosomes of all diploid Asparagus accessions was determined which led to differences in the karyotypic formula. A. plocamoides harbors the smallest chromosome with 1.21 μm, whereas the largest chromosome with 5.43 μm was found in A. officinalis. In all accessions one 5S rDNA locus per genome was observed, while the number of 45S rDNA loci varied between one (A. albus, A. plumosus, A. stipularis) to four (A. setaceus). In most Asparagus accessions, the 5S and 45S rDNA signals were located on different chromosomes. In contrast, the genomes of A. africanus, A. plocamoides, A. sp. (a taxonomically unclassified Asparagus species from Asia) and A. verticillatus (diploid accessions) have one 5S and one 45S rDNA signal on the same chromosome. The measured 2C DNA content ranges from 1.43 pg (A. plocamoides, diploid) to 8.24 pg (A. amarus, hexaploid). Intraspecific variations for chromosome number, karyotypic formula, signal pattern with 5S and 45s rDNA probes and DNA content were observed. Interspecific variations were also recognized in the genus Asparagus.
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spelling pubmed-89261742022-03-17 Karyological and nuclear DNA content variation of the genus Asparagus Plath, Susann Klocke, Evelyn Nothnagel, Thomas PLoS One Research Article Asparagus wild relatives could be a promising possibility to extent the genetic variability of garden asparagus and for new cultivars with favorable traits such as high yield stability, disease resistance and stress tolerance. In order to achieve an efficient use in breeding, a detailed cytogenetic characterization of the accessions is necessary. This study worked on 35 Asparagus accessions, including A. officinalis cultivars (‘Darlise’, ‘Ravel’ and ‘Steiners Violetta’) and Asparagus wild relatives, for which the number of chromosomes, their size, the nuclear DNA content, and the genomic distribution of 5S and 45S rDNA were analyzed. Different ploidy levels (diploid, triploid, tetraploid, pentaploid and hexaploid) were found. Furthermore, the size of the chromosomes of all diploid Asparagus accessions was determined which led to differences in the karyotypic formula. A. plocamoides harbors the smallest chromosome with 1.21 μm, whereas the largest chromosome with 5.43 μm was found in A. officinalis. In all accessions one 5S rDNA locus per genome was observed, while the number of 45S rDNA loci varied between one (A. albus, A. plumosus, A. stipularis) to four (A. setaceus). In most Asparagus accessions, the 5S and 45S rDNA signals were located on different chromosomes. In contrast, the genomes of A. africanus, A. plocamoides, A. sp. (a taxonomically unclassified Asparagus species from Asia) and A. verticillatus (diploid accessions) have one 5S and one 45S rDNA signal on the same chromosome. The measured 2C DNA content ranges from 1.43 pg (A. plocamoides, diploid) to 8.24 pg (A. amarus, hexaploid). Intraspecific variations for chromosome number, karyotypic formula, signal pattern with 5S and 45s rDNA probes and DNA content were observed. Interspecific variations were also recognized in the genus Asparagus. Public Library of Science 2022-03-16 /pmc/articles/PMC8926174/ /pubmed/35294505 http://dx.doi.org/10.1371/journal.pone.0265405 Text en © 2022 Plath et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Plath, Susann
Klocke, Evelyn
Nothnagel, Thomas
Karyological and nuclear DNA content variation of the genus Asparagus
title Karyological and nuclear DNA content variation of the genus Asparagus
title_full Karyological and nuclear DNA content variation of the genus Asparagus
title_fullStr Karyological and nuclear DNA content variation of the genus Asparagus
title_full_unstemmed Karyological and nuclear DNA content variation of the genus Asparagus
title_short Karyological and nuclear DNA content variation of the genus Asparagus
title_sort karyological and nuclear dna content variation of the genus asparagus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926174/
https://www.ncbi.nlm.nih.gov/pubmed/35294505
http://dx.doi.org/10.1371/journal.pone.0265405
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