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Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch

Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type...

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Autores principales: Yang, Yong, Han, Jinlong, Zhang, Yue, Lin, Shizhuo, Liang, Meixia, Zhao, Lizi, Song, Zhizhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/
https://www.ncbi.nlm.nih.gov/pubmed/35310822
http://dx.doi.org/10.1155/2022/5053838
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author Yang, Yong
Han, Jinlong
Zhang, Yue
Lin, Shizhuo
Liang, Meixia
Zhao, Lizi
Song, Zhizhong
author_facet Yang, Yong
Han, Jinlong
Zhang, Yue
Lin, Shizhuo
Liang, Meixia
Zhao, Lizi
Song, Zhizhong
author_sort Yang, Yong
collection PubMed
description Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K(+) channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K(+) channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K(+) channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K(+) channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K(+) channel genes were differentially regulated by abiotic stresses in that K(+) deficiency, and ABA treatment mainly increased the shaker K(+) channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K(+) channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K(+) channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K(+) channel genes in peach and provides a theoretical foundation for K(+) nutrition and balance research in fruit trees.
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spelling pubmed-89265272022-03-17 Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch Yang, Yong Han, Jinlong Zhang, Yue Lin, Shizhuo Liang, Meixia Zhao, Lizi Song, Zhizhong Int J Genomics Research Article Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K(+) channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K(+) channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K(+) channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K(+) channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K(+) channel genes were differentially regulated by abiotic stresses in that K(+) deficiency, and ABA treatment mainly increased the shaker K(+) channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K(+) channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K(+) channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K(+) channel genes in peach and provides a theoretical foundation for K(+) nutrition and balance research in fruit trees. Hindawi 2022-03-09 /pmc/articles/PMC8926527/ /pubmed/35310822 http://dx.doi.org/10.1155/2022/5053838 Text en Copyright © 2022 Yong Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yang, Yong
Han, Jinlong
Zhang, Yue
Lin, Shizhuo
Liang, Meixia
Zhao, Lizi
Song, Zhizhong
Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title_full Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title_fullStr Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title_full_unstemmed Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title_short Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
title_sort genome-wide identification and characterization of the shaker-type k(+) channel genes in prunus persica (l.) batsch
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/
https://www.ncbi.nlm.nih.gov/pubmed/35310822
http://dx.doi.org/10.1155/2022/5053838
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