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Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch
Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/ https://www.ncbi.nlm.nih.gov/pubmed/35310822 http://dx.doi.org/10.1155/2022/5053838 |
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author | Yang, Yong Han, Jinlong Zhang, Yue Lin, Shizhuo Liang, Meixia Zhao, Lizi Song, Zhizhong |
author_facet | Yang, Yong Han, Jinlong Zhang, Yue Lin, Shizhuo Liang, Meixia Zhao, Lizi Song, Zhizhong |
author_sort | Yang, Yong |
collection | PubMed |
description | Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K(+) channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K(+) channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K(+) channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K(+) channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K(+) channel genes were differentially regulated by abiotic stresses in that K(+) deficiency, and ABA treatment mainly increased the shaker K(+) channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K(+) channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K(+) channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K(+) channel genes in peach and provides a theoretical foundation for K(+) nutrition and balance research in fruit trees. |
format | Online Article Text |
id | pubmed-8926527 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-89265272022-03-17 Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch Yang, Yong Han, Jinlong Zhang, Yue Lin, Shizhuo Liang, Meixia Zhao, Lizi Song, Zhizhong Int J Genomics Research Article Shaker-type K(+) channels are critical for plant K(+) acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K(+) channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K(+) channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K(+) channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K(+) channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K(+) channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K(+) channel genes were differentially regulated by abiotic stresses in that K(+) deficiency, and ABA treatment mainly increased the shaker K(+) channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K(+) channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K(+) channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K(+) channel genes in peach and provides a theoretical foundation for K(+) nutrition and balance research in fruit trees. Hindawi 2022-03-09 /pmc/articles/PMC8926527/ /pubmed/35310822 http://dx.doi.org/10.1155/2022/5053838 Text en Copyright © 2022 Yong Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Yang, Yong Han, Jinlong Zhang, Yue Lin, Shizhuo Liang, Meixia Zhao, Lizi Song, Zhizhong Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title | Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title_full | Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title_fullStr | Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title_full_unstemmed | Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title_short | Genome-Wide Identification and Characterization of the Shaker-Type K(+) Channel Genes in Prunus persica (L.) Batsch |
title_sort | genome-wide identification and characterization of the shaker-type k(+) channel genes in prunus persica (l.) batsch |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8926527/ https://www.ncbi.nlm.nih.gov/pubmed/35310822 http://dx.doi.org/10.1155/2022/5053838 |
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