Cargando…
Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges
Linker histone H1 (H1) is an abundant chromatin‐binding protein that acts as an epigenetic regulator binding to nucleosomes and altering chromatin structures and dynamics. Nonetheless, the mechanistic details of its function remain poorly understood. Recent work suggest that the number and position...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8927875/ https://www.ncbi.nlm.nih.gov/pubmed/35066947 http://dx.doi.org/10.1002/pro.4281 |
_version_ | 1784670539575459840 |
---|---|
author | Martinsen, Jacob H. Saar, Daniel Fernandes, Catarina B. Schuler, Benjamin Bugge, Katrine Kragelund, Birthe B. |
author_facet | Martinsen, Jacob H. Saar, Daniel Fernandes, Catarina B. Schuler, Benjamin Bugge, Katrine Kragelund, Birthe B. |
author_sort | Martinsen, Jacob H. |
collection | PubMed |
description | Linker histone H1 (H1) is an abundant chromatin‐binding protein that acts as an epigenetic regulator binding to nucleosomes and altering chromatin structures and dynamics. Nonetheless, the mechanistic details of its function remain poorly understood. Recent work suggest that the number and position of charged side chains on the globular domain (GD) of H1 influence chromatin structure and hence gene repression. Here, we solved the solution structure of the unbound GD of human H1.0, revealing that the structure is almost completely unperturbed by complex formation, except for a loop connecting two antiparallel β‐strands. We further quantified the role of the many positive charges of the GD for its structure and conformational stability through the analysis of 11 charge variants. We find that modulating the number of charges has little effect on the structure, but the stability is affected, resulting in a difference in melting temperature of 26 K between GD of net charge +5 versus +13. This result suggests that the large number of positive charges on H1‐GDs have evolved for function rather than structure and high stability. The stabilization of the GD upon binding to DNA can thus be expected to have a pronounced electrostatic component, a contribution that is amenable to modulation by posttranslational modifications, especially acetylation and phosphorylation. |
format | Online Article Text |
id | pubmed-8927875 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-89278752022-03-24 Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges Martinsen, Jacob H. Saar, Daniel Fernandes, Catarina B. Schuler, Benjamin Bugge, Katrine Kragelund, Birthe B. Protein Sci Full‐Length Papers Linker histone H1 (H1) is an abundant chromatin‐binding protein that acts as an epigenetic regulator binding to nucleosomes and altering chromatin structures and dynamics. Nonetheless, the mechanistic details of its function remain poorly understood. Recent work suggest that the number and position of charged side chains on the globular domain (GD) of H1 influence chromatin structure and hence gene repression. Here, we solved the solution structure of the unbound GD of human H1.0, revealing that the structure is almost completely unperturbed by complex formation, except for a loop connecting two antiparallel β‐strands. We further quantified the role of the many positive charges of the GD for its structure and conformational stability through the analysis of 11 charge variants. We find that modulating the number of charges has little effect on the structure, but the stability is affected, resulting in a difference in melting temperature of 26 K between GD of net charge +5 versus +13. This result suggests that the large number of positive charges on H1‐GDs have evolved for function rather than structure and high stability. The stabilization of the GD upon binding to DNA can thus be expected to have a pronounced electrostatic component, a contribution that is amenable to modulation by posttranslational modifications, especially acetylation and phosphorylation. John Wiley & Sons, Inc. 2022-02-23 2022-04 /pmc/articles/PMC8927875/ /pubmed/35066947 http://dx.doi.org/10.1002/pro.4281 Text en © 2022 The Authors. Protein Science published by Wiley Periodicals LLC on behalf of The Protein Society. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Full‐Length Papers Martinsen, Jacob H. Saar, Daniel Fernandes, Catarina B. Schuler, Benjamin Bugge, Katrine Kragelund, Birthe B. Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title | Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title_full | Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title_fullStr | Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title_full_unstemmed | Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title_short | Structure, dynamics, and stability of the globular domain of human linker histone H1.0 and the role of positive charges |
title_sort | structure, dynamics, and stability of the globular domain of human linker histone h1.0 and the role of positive charges |
topic | Full‐Length Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8927875/ https://www.ncbi.nlm.nih.gov/pubmed/35066947 http://dx.doi.org/10.1002/pro.4281 |
work_keys_str_mv | AT martinsenjacobh structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges AT saardaniel structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges AT fernandescatarinab structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges AT schulerbenjamin structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges AT buggekatrine structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges AT kragelundbirtheb structuredynamicsandstabilityoftheglobulardomainofhumanlinkerhistoneh10andtheroleofpositivecharges |