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Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet

The number of wheat spikes per unit area is one of the most important agronomic traits associated with wheat yield. However, quick and accurate detection for the counting of wheat spikes faces persistent challenges due to the complexity of wheat field conditions. This work has trained a RetinaNet (S...

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Autores principales: Wen, Changji, Wu, Jianshuang, Chen, Hongrui, Su, Hengqiang, Chen, Xiao, Li, Zhuoshi, Yang, Ce
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928106/
https://www.ncbi.nlm.nih.gov/pubmed/35310650
http://dx.doi.org/10.3389/fpls.2022.821717
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author Wen, Changji
Wu, Jianshuang
Chen, Hongrui
Su, Hengqiang
Chen, Xiao
Li, Zhuoshi
Yang, Ce
author_facet Wen, Changji
Wu, Jianshuang
Chen, Hongrui
Su, Hengqiang
Chen, Xiao
Li, Zhuoshi
Yang, Ce
author_sort Wen, Changji
collection PubMed
description The number of wheat spikes per unit area is one of the most important agronomic traits associated with wheat yield. However, quick and accurate detection for the counting of wheat spikes faces persistent challenges due to the complexity of wheat field conditions. This work has trained a RetinaNet (SpikeRetinaNet) based on several optimizations to detect and count wheat spikes efficiently. This RetinaNet consists of several improvements. First, a weighted bidirectional feature pyramid network (BiFPN) was introduced into the feature pyramid network (FPN) of RetinaNet, which could fuse multiscale features to recognize wheat spikes in different varieties and complicated environments. Then, to detect objects more efficiently, focal loss and attention modules were added. Finally, soft non-maximum suppression (Soft-NMS) was used to solve the occlusion problem. Based on these improvements, the new network detector was created and tested on the Global Wheat Head Detection (GWHD) dataset supplemented with wheat-wheatgrass spike detection (WSD) images. The WSD images were supplemented with new varieties of wheat, which makes the mixed dataset richer in species. The method of this study achieved 0.9262 for mAP50, which improved by 5.59, 49.06, 2.79, 1.35, and 7.26% compared to the state-of-the-art RetinaNet, single-shot multiBox detector (SSD), You Only Look Once version3 (Yolov3), You Only Look Once version4 (Yolov4), and faster region-based convolutional neural network (Faster-RCNN), respectively. In addition, the counting accuracy reached 0.9288, which was improved from other methods as well. Our implementation code and partial validation data are available at https://github.com/wujians122/The-Wheat-Spikes-Detecting-and-Counting.
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spelling pubmed-89281062022-03-18 Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet Wen, Changji Wu, Jianshuang Chen, Hongrui Su, Hengqiang Chen, Xiao Li, Zhuoshi Yang, Ce Front Plant Sci Plant Science The number of wheat spikes per unit area is one of the most important agronomic traits associated with wheat yield. However, quick and accurate detection for the counting of wheat spikes faces persistent challenges due to the complexity of wheat field conditions. This work has trained a RetinaNet (SpikeRetinaNet) based on several optimizations to detect and count wheat spikes efficiently. This RetinaNet consists of several improvements. First, a weighted bidirectional feature pyramid network (BiFPN) was introduced into the feature pyramid network (FPN) of RetinaNet, which could fuse multiscale features to recognize wheat spikes in different varieties and complicated environments. Then, to detect objects more efficiently, focal loss and attention modules were added. Finally, soft non-maximum suppression (Soft-NMS) was used to solve the occlusion problem. Based on these improvements, the new network detector was created and tested on the Global Wheat Head Detection (GWHD) dataset supplemented with wheat-wheatgrass spike detection (WSD) images. The WSD images were supplemented with new varieties of wheat, which makes the mixed dataset richer in species. The method of this study achieved 0.9262 for mAP50, which improved by 5.59, 49.06, 2.79, 1.35, and 7.26% compared to the state-of-the-art RetinaNet, single-shot multiBox detector (SSD), You Only Look Once version3 (Yolov3), You Only Look Once version4 (Yolov4), and faster region-based convolutional neural network (Faster-RCNN), respectively. In addition, the counting accuracy reached 0.9288, which was improved from other methods as well. Our implementation code and partial validation data are available at https://github.com/wujians122/The-Wheat-Spikes-Detecting-and-Counting. Frontiers Media S.A. 2022-03-03 /pmc/articles/PMC8928106/ /pubmed/35310650 http://dx.doi.org/10.3389/fpls.2022.821717 Text en Copyright © 2022 Wen, Wu, Chen, Su, Chen, Li and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Wen, Changji
Wu, Jianshuang
Chen, Hongrui
Su, Hengqiang
Chen, Xiao
Li, Zhuoshi
Yang, Ce
Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title_full Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title_fullStr Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title_full_unstemmed Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title_short Wheat Spike Detection and Counting in the Field Based on SpikeRetinaNet
title_sort wheat spike detection and counting in the field based on spikeretinanet
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928106/
https://www.ncbi.nlm.nih.gov/pubmed/35310650
http://dx.doi.org/10.3389/fpls.2022.821717
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