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Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review

Machine learning (ML) holds great potential for predicting clinical outcomes in heterogeneous chronic respiratory diseases (CRD) affecting children, where timely individualised treatments offer opportunities for health optimisation. This paper identifies rate-limiting steps in ML prediction model de...

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Autores principales: Filipow, Nicole, Main, Eleanor, Sebire, Neil J, Booth, John, Taylor, Andrew M, Davies, Gwyneth, Stanojevic, Sanja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BMJ Publishing Group 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928277/
https://www.ncbi.nlm.nih.gov/pubmed/35297371
http://dx.doi.org/10.1136/bmjresp-2021-001165
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author Filipow, Nicole
Main, Eleanor
Sebire, Neil J
Booth, John
Taylor, Andrew M
Davies, Gwyneth
Stanojevic, Sanja
author_facet Filipow, Nicole
Main, Eleanor
Sebire, Neil J
Booth, John
Taylor, Andrew M
Davies, Gwyneth
Stanojevic, Sanja
author_sort Filipow, Nicole
collection PubMed
description Machine learning (ML) holds great potential for predicting clinical outcomes in heterogeneous chronic respiratory diseases (CRD) affecting children, where timely individualised treatments offer opportunities for health optimisation. This paper identifies rate-limiting steps in ML prediction model development that impair clinical translation and discusses regulatory, clinical and ethical considerations for ML implementation. A scoping review of ML prediction models in paediatric CRDs was undertaken using the PRISMA extension scoping review guidelines. From 1209 results, 25 articles published between 2013 and 2021 were evaluated for features of a good clinical prediction model using the Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis (TRIPOD) guidelines. Most of the studies were in asthma (80%), with few in cystic fibrosis (12%), bronchiolitis (4%) and childhood wheeze (4%). There were inconsistencies in model reporting and studies were limited by a lack of validation, and absence of equations or code for replication. Clinician involvement during ML model development is essential and diversity, equity and inclusion should be assessed at each step of the ML pipeline to ensure algorithms do not promote or amplify health disparities among marginalised groups. As ML prediction studies become more frequent, it is important that models are rigorously developed using published guidelines and take account of regulatory frameworks which depend on model complexity, patient safety, accountability and liability.
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spelling pubmed-89282772022-04-01 Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review Filipow, Nicole Main, Eleanor Sebire, Neil J Booth, John Taylor, Andrew M Davies, Gwyneth Stanojevic, Sanja BMJ Open Respir Res Respiratory Epidemiology Machine learning (ML) holds great potential for predicting clinical outcomes in heterogeneous chronic respiratory diseases (CRD) affecting children, where timely individualised treatments offer opportunities for health optimisation. This paper identifies rate-limiting steps in ML prediction model development that impair clinical translation and discusses regulatory, clinical and ethical considerations for ML implementation. A scoping review of ML prediction models in paediatric CRDs was undertaken using the PRISMA extension scoping review guidelines. From 1209 results, 25 articles published between 2013 and 2021 were evaluated for features of a good clinical prediction model using the Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis (TRIPOD) guidelines. Most of the studies were in asthma (80%), with few in cystic fibrosis (12%), bronchiolitis (4%) and childhood wheeze (4%). There were inconsistencies in model reporting and studies were limited by a lack of validation, and absence of equations or code for replication. Clinician involvement during ML model development is essential and diversity, equity and inclusion should be assessed at each step of the ML pipeline to ensure algorithms do not promote or amplify health disparities among marginalised groups. As ML prediction studies become more frequent, it is important that models are rigorously developed using published guidelines and take account of regulatory frameworks which depend on model complexity, patient safety, accountability and liability. BMJ Publishing Group 2022-03-16 /pmc/articles/PMC8928277/ /pubmed/35297371 http://dx.doi.org/10.1136/bmjresp-2021-001165 Text en © Author(s) (or their employer(s)) 2022. Re-use permitted under CC BY. Published by BMJ. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed in accordance with the Creative Commons Attribution 4.0 Unported (CC BY 4.0) license, which permits others to copy, redistribute, remix, transform and build upon this work for any purpose, provided the original work is properly cited, a link to the licence is given, and indication of whether changes were made. See: https://creativecommons.org/licenses/by/4.0/.
spellingShingle Respiratory Epidemiology
Filipow, Nicole
Main, Eleanor
Sebire, Neil J
Booth, John
Taylor, Andrew M
Davies, Gwyneth
Stanojevic, Sanja
Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title_full Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title_fullStr Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title_full_unstemmed Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title_short Implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
title_sort implementation of prognostic machine learning algorithms in paediatric chronic respiratory conditions: a scoping review
topic Respiratory Epidemiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8928277/
https://www.ncbi.nlm.nih.gov/pubmed/35297371
http://dx.doi.org/10.1136/bmjresp-2021-001165
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